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This project comprises all infrastructure related source-code, integrates all necessary parsers and auxiliary projects, and contains the necessary deployment and operation scripts of the current consolidated NOMAD repository and archive.

Morphological time-series and pilot data analysis.

R code for analysis of scRNA-seq data set.

Data and figure repository for our DeepOF paper: Automatically annotated motion tracking identifies a distinct social behavioral profile following chronic social defeat stress.

Pre-print available at: https://www.biorxiv.org/content/10.1101/2022.06.23.497350v1

PCA (SVD) for the C. hirsuta population genomics paper

Decomposition of gene expression contribution in variants, microRNA and ATAC peaks for SCZ and controls samples (LMU and MPI)

R code for generating an interactive viewer for a journal citation network based on the number of citations between journals per year, together with a UI to filter the displayed nodes and edges. The nodes are clustered using the Louvain method. The resulting journal clusters can optionally be given a Human-readable label via the OpenAI API. See https://cboul.pages.mpcdf.de/journal-network-viewer/

This repository contains the scripts used to conduct the bioinformatics and statistical analyses presented in Kapopoulou & Kapun et al (2020). Any further request should be made at laurent@mpipz.mpg.de

In this project, we will try to analyze genetic variants in genomic regions of Transcription Factors