Improved incremental processing and upload API

Merged David Sikter requested to merge 587-improved-incremental-processing-and-upload-api into v1.0.0

Closes #587 (closed). Introduces an additional path_filter argument to the process_upload that enables limiting the processing to a specific path. This is used to optimize the API calls to put and delete individual files and folders at the specified raw path.

Edited by David Sikter

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