Correct include formatting

Use "file" when it is considered standard

src/classification/ConvexHull1D.cpp

-#include <classification/ConvexHull1D.hpp>
+#include "classification/ConvexHull1D.hpp"
 
 ConvexHull1D::ConvexHull1D() :
     _sorted_value(),

src/classification/ConvexHull1D.hpp

@@ -8,10 +8,12 @@
 #ifndef CONVEX_UTILS
 #define CONVEX_UTILS
 
-#include <utils/math_funcs.hpp>
 #include <iomanip>
+
 #include <coin/ClpSimplex.hpp>
-#include <classification/prop_sorted_d_mat.hpp>
+
+#include "classification/prop_sorted_d_mat.hpp"
+#include "utils/math_funcs.hpp"
 
 class ConvexHull1D
 {

src/classification/LPWrapper.cpp

-#include <classification/LPWrapper.hpp>
+#include "classification/LPWrapper.hpp"
+
 LPWrapper::LPWrapper(std::vector<int> samp_per_class, const int task_num, const int n_class, const int n_dim, const int n_samp, const double tol) :
     _elements((n_dim + 1) * n_samp, 0.0),
     _row_lower((n_dim + 1) * n_samp, 1.0),

src/classification/LPWrapper.hpp

@@ -14,8 +14,8 @@
 
 #include <coin/ClpSimplex.hpp>
 
-#include <classification/prop_sorted_d_mat.hpp>
-#include <utils/mkl_interface.hpp>
+#include "classification/prop_sorted_d_mat.hpp"
+#include "utils/mkl_interface.hpp"
 class LPWrapper
 {
 protected:

src/classification/SVMWrapper.cpp

-#include <classification/SVMWrapper.hpp>
+#include "classification/SVMWrapper.hpp"
 
 SVMWrapper::SVMWrapper(const int n_class, const int n_dim, const int n_samp, const double* prop) :
     _model(nullptr),

src/classification/SVMWrapper.hpp

@@ -12,8 +12,8 @@
 #include <iostream>
 #include <numeric>
 
-#include <classification/prop_sorted_d_mat.hpp>
-#include <external/libsvm/svm.h>
+#include "classification/prop_sorted_d_mat.hpp"
+#include "external/libsvm/svm.h"
 
 class SVMWrapper
 {

src/classification/prop_sorted_d_mat.cpp

-#include <classification/prop_sorted_d_mat.hpp>
+#include "classification/prop_sorted_d_mat.hpp"
 
 std::vector<double> prop_sorted_d_mat::SORTED_D_MATRIX;
 

src/classification/prop_sorted_d_mat.hpp

-/** @file <classification/prop_sorted_d_mat.hp
+/** @file classification/prop_sorted_d_mat.hpp
  *  @brief Central storage area for a sorted descriptor matrix based on the task/class of a sample
 
  *  @author Thomas A. R. Purcell (tpurcell)

src/descriptor_identifier/Model/Model.cpp

-#include <descriptor_identifier/Model/Model.hpp>
+#include "descriptor_identifier/Model/Model.hpp"
 
 Model::Model(
     const std::string prop_label,

src/descriptor_identifier/Model/Model.hpp

@@ -14,12 +14,12 @@
 #include <boost/algorithm/string/trim.hpp>
 #include <boost/filesystem.hpp>
 
-#include<iomanip>
-#include<fstream>
-#include<iostream>
+#include <iomanip>
+#include <fstream>
+#include <iostream>
 
-#include <feature_creation/node/ModelNode.hpp>
-#include <utils/string_utils.hpp>
+#include "feature_creation/node/ModelNode.hpp"
+#include "utils/string_utils.hpp"
 
 #ifdef PY_BINDINGS
     namespace np = boost::python::numpy;

src/descriptor_identifier/Model/ModelClassifier.cpp

-#include <descriptor_identifier/Model/ModelClassifier.hpp>
+#include "descriptor_identifier/Model/ModelClassifier.hpp"
 
 ModelClassifier::ModelClassifier(
     const std::string prop_label,

src/descriptor_identifier/Model/ModelClassifier.hpp

@@ -14,16 +14,16 @@
 #include <boost/algorithm/string/trim.hpp>
 #include <boost/filesystem.hpp>
 
-#include<iomanip>
-#include<fstream>
-#include<iostream>
+#include <iomanip>
+#include <fstream>
+#include <iostream>
 
 #include <coin/ClpSimplex.hpp>
 
-#include <classification/SVMWrapper.hpp>
-#include <descriptor_identifier/Model/Model.hpp>
-#include <feature_creation/node/ModelNode.hpp>
-#include <utils/string_utils.hpp>
+#include "classification/SVMWrapper.hpp"
+#include "descriptor_identifier/Model/Model.hpp"
+#include "feature_creation/node/ModelNode.hpp"
+#include "utils/string_utils.hpp"
 
 #ifdef PY_BINDINGS
     namespace np = boost::python::numpy;

src/descriptor_identifier/Model/ModelLogRegressor.cpp

-#include <descriptor_identifier/Model/ModelLogRegressor.hpp>
+#include "descriptor_identifier/Model/ModelLogRegressor.hpp"
 
 ModelLogRegressor::ModelLogRegressor()
 {}

src/descriptor_identifier/Model/ModelLogRegressor.hpp

@@ -10,7 +10,7 @@
 #ifndef MODEL_LOG_REGRESSOR
 #define MODEL_LOG_REGRESSOR
 
-#include <descriptor_identifier/Model/ModelRegressor.hpp>
+#include "descriptor_identifier/Model/ModelRegressor.hpp"
 
 #ifdef PY_BINDINGS
     namespace np = boost::python::numpy;

src/descriptor_identifier/Model/ModelRegressor.cpp

-#include <descriptor_identifier/Model/ModelRegressor.hpp>
+#include "descriptor_identifier/Model/ModelRegressor.hpp"
 
 ModelRegressor::ModelRegressor()
 {}

src/descriptor_identifier/Model/ModelRegressor.hpp

@@ -18,9 +18,9 @@
 #include<fstream>
 #include<iostream>
 
-#include <descriptor_identifier/Model/Model.hpp>
-#include <feature_creation/node/ModelNode.hpp>
-#include <utils/string_utils.hpp>
+#include "descriptor_identifier/Model/Model.hpp"
+#include "feature_creation/node/ModelNode.hpp"
+#include "utils/string_utils.hpp"
 
 #ifdef PY_BINDINGS
     namespace np = boost::python::numpy;

src/descriptor_identifier/SISSO_DI/SISSOClassifier.cpp

-#include <descriptor_identifier/SISSO_DI/SISSOClassifier.hpp>
+#include "descriptor_identifier/SISSO_DI/SISSOClassifier.hpp"
 
 SISSOClassifier::SISSOClassifier(
     const std::shared_ptr<FeatureSpace> feat_space,

src/descriptor_identifier/SISSO_DI/SISSOClassifier.hpp

@@ -11,12 +11,12 @@
 
 #include <coin/ClpSimplex.hpp>
 
-#include <classification/prop_sorted_d_mat.hpp>
-#include <classification/SVMWrapper.hpp>
-#include <classification/LPWrapper.hpp>
-#include <feature_creation/feature_space/FeatureSpace.hpp>
-#include <descriptor_identifier/Model/ModelClassifier.hpp>
-#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp>
+#include "classification/prop_sorted_d_mat.hpp"
+#include "classification/SVMWrapper.hpp"
+#include "classification/LPWrapper.hpp"
+#include "feature_creation/feature_space/FeatureSpace.hpp"
+#include "descriptor_identifier/Model/ModelClassifier.hpp"
+#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp"
 
 #include <ctime>
 #include <iomanip>

src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.cpp

-#include <descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp>
+#include "descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp"
 
 SISSOLogRegressor::SISSOLogRegressor(
     const std::shared_ptr<FeatureSpace> feat_space,

src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp

@@ -9,8 +9,8 @@
 #ifndef SISSO_LOG_REGRESSOR
 #define SISSO_LOG_REGRESSOR
 
-#include <descriptor_identifier/Model/ModelLogRegressor.hpp>
-#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp>
+#include "descriptor_identifier/Model/ModelLogRegressor.hpp"
+#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp"
 
 #ifdef PY_BINDINGS
     namespace np = boost::python::numpy;