From 5864c3922d125cc229fb30678c227be290a64ec4 Mon Sep 17 00:00:00 2001 From: Thomas <purcell@fhi-berlin.mpg.de> Date: Mon, 19 Apr 2021 17:53:11 +0200 Subject: [PATCH] Correct include formatting Use "file" when it is considered standard --- src/classification/ConvexHull1D.cpp | 2 +- src/classification/ConvexHull1D.hpp | 6 +- src/classification/LPWrapper.cpp | 3 +- src/classification/LPWrapper.hpp | 4 +- src/classification/SVMWrapper.cpp | 2 +- src/classification/SVMWrapper.hpp | 4 +- src/classification/prop_sorted_d_mat.cpp | 2 +- src/classification/prop_sorted_d_mat.hpp | 2 +- src/descriptor_identifier/Model/Model.cpp | 2 +- src/descriptor_identifier/Model/Model.hpp | 10 +-- .../Model/ModelClassifier.cpp | 2 +- .../Model/ModelClassifier.hpp | 14 ++-- .../Model/ModelLogRegressor.cpp | 2 +- .../Model/ModelLogRegressor.hpp | 2 +- .../Model/ModelRegressor.cpp | 2 +- .../Model/ModelRegressor.hpp | 6 +- .../SISSO_DI/SISSOClassifier.cpp | 2 +- .../SISSO_DI/SISSOClassifier.hpp | 12 ++-- .../SISSO_DI/SISSOLogRegressor.cpp | 2 +- .../SISSO_DI/SISSOLogRegressor.hpp | 4 +- .../SISSO_DI/SISSORegressor.cpp | 2 +- .../SISSO_DI/SISSORegressor.hpp | 7 +- .../SISSO_DI/SISSO_DI.cpp | 2 +- .../SISSO_DI/SISSO_DI.hpp | 5 +- .../feature_space/FeatureSpace.cpp | 3 +- .../feature_space/FeatureSpace.hpp | 20 +++--- src/feature_creation/node/FeatureNode.cpp | 2 +- src/feature_creation/node/FeatureNode.hpp | 13 ++-- src/feature_creation/node/ModelNode.cpp | 2 +- src/feature_creation/node/ModelNode.hpp | 6 +- src/feature_creation/node/Node.cpp | 2 +- src/feature_creation/node/Node.hpp | 12 ++-- .../node/operator_nodes/OperatorNode.cpp | 2 +- .../node/operator_nodes/OperatorNode.hpp | 12 ++-- .../abs/absolute_value.cpp | 2 +- .../abs/absolute_value.hpp | 2 +- .../abs/parameterized_absolute_value.cpp | 2 +- .../abs/parameterized_absolute_value.hpp | 4 +- .../abs_diff/absolute_difference.cpp | 4 +- .../abs_diff/absolute_difference.hpp | 2 +- .../parameterized_absolute_difference.cpp | 2 +- .../parameterized_absolute_difference.hpp | 4 +- .../allowed_operator_nodes/add/add.cpp | 2 +- .../allowed_operator_nodes/add/add.hpp | 2 +- .../add/parameterized_add.cpp | 2 +- .../add/parameterized_add.hpp | 4 +- .../allowed_operator_nodes/cb/cube.cpp | 2 +- .../allowed_operator_nodes/cb/cube.hpp | 2 +- .../cb/parameterized_cube.cpp | 2 +- .../cb/parameterized_cube.hpp | 4 +- .../allowed_operator_nodes/cbrt/cube_root.cpp | 2 +- .../allowed_operator_nodes/cbrt/cube_root.hpp | 2 +- .../cbrt/parameterized_cube_root.cpp | 2 +- .../cbrt/parameterized_cube_root.hpp | 4 +- .../allowed_operator_nodes/cos/cos.cpp | 2 +- .../allowed_operator_nodes/cos/cos.hpp | 2 +- .../cos/parameterized_cos.cpp | 2 +- .../cos/parameterized_cos.hpp | 4 +- .../allowed_operator_nodes/div/divide.cpp | 2 +- .../allowed_operator_nodes/div/divide.hpp | 2 +- .../div/parameterized_divide.cpp | 2 +- .../div/parameterized_divide.hpp | 4 +- .../exp/exponential.cpp | 2 +- .../exp/exponential.hpp | 2 +- .../exp/parameterized_exponential.cpp | 2 +- .../exp/parameterized_exponential.hpp | 4 +- .../allowed_operator_nodes/inv/inverse.cpp | 2 +- .../allowed_operator_nodes/inv/inverse.hpp | 2 +- .../inv/parameterized_inverse.cpp | 2 +- .../inv/parameterized_inverse.hpp | 4 +- .../allowed_operator_nodes/log/log.cpp | 2 +- .../allowed_operator_nodes/log/log.hpp | 2 +- .../log/parameterized_log.cpp | 2 +- .../log/parameterized_log.hpp | 4 +- .../allowed_operator_nodes/mult/multiply.cpp | 2 +- .../allowed_operator_nodes/mult/multiply.hpp | 2 +- .../mult/parameterized_multiply.cpp | 2 +- .../mult/parameterized_multiply.hpp | 4 +- .../neg_exp/negative_exponential.cpp | 2 +- .../neg_exp/negative_exponential.hpp | 2 +- .../parameterized_negative_exponential.cpp | 2 +- .../parameterized_negative_exponential.hpp | 4 +- .../sin/parameterized_sin.cpp | 2 +- .../sin/parameterized_sin.hpp | 4 +- .../allowed_operator_nodes/sin/sin.cpp | 2 +- .../allowed_operator_nodes/sin/sin.hpp | 2 +- .../six_pow/parameterized_sixth_power.cpp | 2 +- .../six_pow/parameterized_sixth_power.hpp | 4 +- .../six_pow/sixth_power.cpp | 2 +- .../six_pow/sixth_power.hpp | 2 +- .../sq/parameterized_square.cpp | 2 +- .../sq/parameterized_square.hpp | 4 +- .../allowed_operator_nodes/sq/square.cpp | 2 +- .../allowed_operator_nodes/sq/square.hpp | 2 +- .../sqrt/parameterized_square_root.cpp | 2 +- .../sqrt/parameterized_square_root.hpp | 4 +- .../sqrt/square_root.cpp | 2 +- .../sqrt/square_root.hpp | 2 +- .../sub/parameterized_subtract.cpp | 2 +- .../sub/parameterized_subtract.hpp | 4 +- .../allowed_operator_nodes/sub/subtract.cpp | 2 +- .../allowed_operator_nodes/sub/subtract.hpp | 3 +- .../node/operator_nodes/allowed_ops.cpp | 2 +- .../node/operator_nodes/allowed_ops.hpp | 68 +++++++++---------- .../operator_nodes/allowed_parameter_ops.cpp | 2 +- src/feature_creation/node/utils.cpp | 2 +- src/feature_creation/node/utils.hpp | 10 +-- .../value_storage/nodes_value_containers.cpp | 3 +- .../value_storage/nodes_value_containers.hpp | 2 +- src/feature_creation/units/Unit.cpp | 2 +- src/feature_creation/units/Unit.hpp | 2 +- src/inputs/InputParser.cpp | 2 +- src/inputs/InputParser.hpp | 4 +- src/main.cpp | 13 ++-- src/mpi_interface/MPI_Interface.cpp | 2 +- src/mpi_interface/MPI_ops.cpp | 2 +- src/mpi_interface/MPI_ops.hpp | 5 +- src/nl_opt/NLOptWrapper.cpp | 3 +- src/nl_opt/NLOptWrapper.hpp | 4 +- src/python/bindings_docstring_keyed.cpp | 2 +- src/python/bindings_docstring_keyed.hpp | 14 ++-- src/python/conversion_utils.hpp | 6 +- src/python/descriptor_identifier/Model.cpp | 2 +- .../descriptor_identifier/ModelClassifier.cpp | 2 +- .../descriptor_identifier/SISSOClassifier.cpp | 2 +- .../SISSOLogRegressor.cpp | 2 +- .../descriptor_identifier/SISSORegressor.cpp | 2 +- src/python/descriptor_identifier/SISSO_DI.cpp | 2 +- src/python/feature_creation/FeatureNode.cpp | 2 +- src/python/feature_creation/FeatureSpace.cpp | 2 +- src/python/feature_creation/ModelNode.cpp | 2 +- src/python/feature_creation/node_utils.cpp | 2 +- src/python/feature_creation/node_utils.hpp | 4 +- src/utils/compare_features.cpp | 2 +- src/utils/compare_features.hpp | 2 +- src/utils/math_funcs.cpp | 2 +- src/utils/math_funcs.hpp | 4 +- src/utils/project.cpp | 2 +- src/utils/project.hpp | 6 +- src/utils/string_utils.cpp | 2 +- 140 files changed, 272 insertions(+), 270 deletions(-) diff --git a/src/classification/ConvexHull1D.cpp b/src/classification/ConvexHull1D.cpp index 6c01621e..9359f7ac 100644 --- a/src/classification/ConvexHull1D.cpp +++ b/src/classification/ConvexHull1D.cpp @@ -1,4 +1,4 @@ -#include <classification/ConvexHull1D.hpp> +#include "classification/ConvexHull1D.hpp" ConvexHull1D::ConvexHull1D() : _sorted_value(), diff --git a/src/classification/ConvexHull1D.hpp b/src/classification/ConvexHull1D.hpp index b4ff3921..6f50c6a9 100644 --- a/src/classification/ConvexHull1D.hpp +++ b/src/classification/ConvexHull1D.hpp @@ -8,10 +8,12 @@ #ifndef CONVEX_UTILS #define CONVEX_UTILS -#include <utils/math_funcs.hpp> #include <iomanip> + #include <coin/ClpSimplex.hpp> -#include <classification/prop_sorted_d_mat.hpp> + +#include "classification/prop_sorted_d_mat.hpp" +#include "utils/math_funcs.hpp" class ConvexHull1D { diff --git a/src/classification/LPWrapper.cpp b/src/classification/LPWrapper.cpp index dbe7bf57..5fd46e7a 100644 --- a/src/classification/LPWrapper.cpp +++ b/src/classification/LPWrapper.cpp @@ -1,4 +1,5 @@ -#include <classification/LPWrapper.hpp> +#include "classification/LPWrapper.hpp" + LPWrapper::LPWrapper(std::vector<int> samp_per_class, const int task_num, const int n_class, const int n_dim, const int n_samp, const double tol) : _elements((n_dim + 1) * n_samp, 0.0), _row_lower((n_dim + 1) * n_samp, 1.0), diff --git a/src/classification/LPWrapper.hpp b/src/classification/LPWrapper.hpp index f3157242..7c4ee427 100644 --- a/src/classification/LPWrapper.hpp +++ b/src/classification/LPWrapper.hpp @@ -14,8 +14,8 @@ #include <coin/ClpSimplex.hpp> -#include <classification/prop_sorted_d_mat.hpp> -#include <utils/mkl_interface.hpp> +#include "classification/prop_sorted_d_mat.hpp" +#include "utils/mkl_interface.hpp" class LPWrapper { protected: diff --git a/src/classification/SVMWrapper.cpp b/src/classification/SVMWrapper.cpp index 53048ab1..97a0e1a0 100644 --- a/src/classification/SVMWrapper.cpp +++ b/src/classification/SVMWrapper.cpp @@ -1,4 +1,4 @@ -#include <classification/SVMWrapper.hpp> +#include "classification/SVMWrapper.hpp" SVMWrapper::SVMWrapper(const int n_class, const int n_dim, const int n_samp, const double* prop) : _model(nullptr), diff --git a/src/classification/SVMWrapper.hpp b/src/classification/SVMWrapper.hpp index 3fbf758b..e97dc8cc 100644 --- a/src/classification/SVMWrapper.hpp +++ b/src/classification/SVMWrapper.hpp @@ -12,8 +12,8 @@ #include <iostream> #include <numeric> -#include <classification/prop_sorted_d_mat.hpp> -#include <external/libsvm/svm.h> +#include "classification/prop_sorted_d_mat.hpp" +#include "external/libsvm/svm.h" class SVMWrapper { diff --git a/src/classification/prop_sorted_d_mat.cpp b/src/classification/prop_sorted_d_mat.cpp index 37e5bd0d..500e6733 100644 --- a/src/classification/prop_sorted_d_mat.cpp +++ b/src/classification/prop_sorted_d_mat.cpp @@ -1,4 +1,4 @@ -#include <classification/prop_sorted_d_mat.hpp> +#include "classification/prop_sorted_d_mat.hpp" std::vector<double> prop_sorted_d_mat::SORTED_D_MATRIX; diff --git a/src/classification/prop_sorted_d_mat.hpp b/src/classification/prop_sorted_d_mat.hpp index c604329b..3043d41f 100644 --- a/src/classification/prop_sorted_d_mat.hpp +++ b/src/classification/prop_sorted_d_mat.hpp @@ -1,4 +1,4 @@ -/** @file <classification/prop_sorted_d_mat.hp +/** @file classification/prop_sorted_d_mat.hpp * @brief Central storage area for a sorted descriptor matrix based on the task/class of a sample * @author Thomas A. R. Purcell (tpurcell) diff --git a/src/descriptor_identifier/Model/Model.cpp b/src/descriptor_identifier/Model/Model.cpp index 4b43809b..1e05768c 100644 --- a/src/descriptor_identifier/Model/Model.cpp +++ b/src/descriptor_identifier/Model/Model.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/Model.hpp> +#include "descriptor_identifier/Model/Model.hpp" Model::Model( const std::string prop_label, diff --git a/src/descriptor_identifier/Model/Model.hpp b/src/descriptor_identifier/Model/Model.hpp index 0022ef8e..ba545681 100644 --- a/src/descriptor_identifier/Model/Model.hpp +++ b/src/descriptor_identifier/Model/Model.hpp @@ -14,12 +14,12 @@ #include <boost/algorithm/string/trim.hpp> #include <boost/filesystem.hpp> -#include<iomanip> -#include<fstream> -#include<iostream> +#include <iomanip> +#include <fstream> +#include <iostream> -#include <feature_creation/node/ModelNode.hpp> -#include <utils/string_utils.hpp> +#include "feature_creation/node/ModelNode.hpp" +#include "utils/string_utils.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; diff --git a/src/descriptor_identifier/Model/ModelClassifier.cpp b/src/descriptor_identifier/Model/ModelClassifier.cpp index f1f33766..5d5df407 100644 --- a/src/descriptor_identifier/Model/ModelClassifier.cpp +++ b/src/descriptor_identifier/Model/ModelClassifier.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/ModelClassifier.hpp> +#include "descriptor_identifier/Model/ModelClassifier.hpp" ModelClassifier::ModelClassifier( const std::string prop_label, diff --git a/src/descriptor_identifier/Model/ModelClassifier.hpp b/src/descriptor_identifier/Model/ModelClassifier.hpp index 04e4ffd6..1ff38237 100644 --- a/src/descriptor_identifier/Model/ModelClassifier.hpp +++ b/src/descriptor_identifier/Model/ModelClassifier.hpp @@ -14,16 +14,16 @@ #include <boost/algorithm/string/trim.hpp> #include <boost/filesystem.hpp> -#include<iomanip> -#include<fstream> -#include<iostream> +#include <iomanip> +#include <fstream> +#include <iostream> #include <coin/ClpSimplex.hpp> -#include <classification/SVMWrapper.hpp> -#include <descriptor_identifier/Model/Model.hpp> -#include <feature_creation/node/ModelNode.hpp> -#include <utils/string_utils.hpp> +#include "classification/SVMWrapper.hpp" +#include "descriptor_identifier/Model/Model.hpp" +#include "feature_creation/node/ModelNode.hpp" +#include "utils/string_utils.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; diff --git a/src/descriptor_identifier/Model/ModelLogRegressor.cpp b/src/descriptor_identifier/Model/ModelLogRegressor.cpp index 652d2975..56e6fbee 100644 --- a/src/descriptor_identifier/Model/ModelLogRegressor.cpp +++ b/src/descriptor_identifier/Model/ModelLogRegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/ModelLogRegressor.hpp> +#include "descriptor_identifier/Model/ModelLogRegressor.hpp" ModelLogRegressor::ModelLogRegressor() {} diff --git a/src/descriptor_identifier/Model/ModelLogRegressor.hpp b/src/descriptor_identifier/Model/ModelLogRegressor.hpp index ef9b5109..3309bcf1 100644 --- a/src/descriptor_identifier/Model/ModelLogRegressor.hpp +++ b/src/descriptor_identifier/Model/ModelLogRegressor.hpp @@ -10,7 +10,7 @@ #ifndef MODEL_LOG_REGRESSOR #define MODEL_LOG_REGRESSOR -#include <descriptor_identifier/Model/ModelRegressor.hpp> +#include "descriptor_identifier/Model/ModelRegressor.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; diff --git a/src/descriptor_identifier/Model/ModelRegressor.cpp b/src/descriptor_identifier/Model/ModelRegressor.cpp index dd38fc25..dcd61a60 100644 --- a/src/descriptor_identifier/Model/ModelRegressor.cpp +++ b/src/descriptor_identifier/Model/ModelRegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/ModelRegressor.hpp> +#include "descriptor_identifier/Model/ModelRegressor.hpp" ModelRegressor::ModelRegressor() {} diff --git a/src/descriptor_identifier/Model/ModelRegressor.hpp b/src/descriptor_identifier/Model/ModelRegressor.hpp index a70182ea..86fbdac3 100644 --- a/src/descriptor_identifier/Model/ModelRegressor.hpp +++ b/src/descriptor_identifier/Model/ModelRegressor.hpp @@ -18,9 +18,9 @@ #include<fstream> #include<iostream> -#include <descriptor_identifier/Model/Model.hpp> -#include <feature_creation/node/ModelNode.hpp> -#include <utils/string_utils.hpp> +#include "descriptor_identifier/Model/Model.hpp" +#include "feature_creation/node/ModelNode.hpp" +#include "utils/string_utils.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; diff --git a/src/descriptor_identifier/SISSO_DI/SISSOClassifier.cpp b/src/descriptor_identifier/SISSO_DI/SISSOClassifier.cpp index 8931049a..45950f27 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSOClassifier.cpp +++ b/src/descriptor_identifier/SISSO_DI/SISSOClassifier.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSOClassifier.hpp> +#include "descriptor_identifier/SISSO_DI/SISSOClassifier.hpp" SISSOClassifier::SISSOClassifier( const std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/descriptor_identifier/SISSO_DI/SISSOClassifier.hpp b/src/descriptor_identifier/SISSO_DI/SISSOClassifier.hpp index cd8ffc03..11a9d6ff 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSOClassifier.hpp +++ b/src/descriptor_identifier/SISSO_DI/SISSOClassifier.hpp @@ -11,12 +11,12 @@ #include <coin/ClpSimplex.hpp> -#include <classification/prop_sorted_d_mat.hpp> -#include <classification/SVMWrapper.hpp> -#include <classification/LPWrapper.hpp> -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <descriptor_identifier/Model/ModelClassifier.hpp> -#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp> +#include "classification/prop_sorted_d_mat.hpp" +#include "classification/SVMWrapper.hpp" +#include "classification/LPWrapper.hpp" +#include "feature_creation/feature_space/FeatureSpace.hpp" +#include "descriptor_identifier/Model/ModelClassifier.hpp" +#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp" #include <ctime> #include <iomanip> diff --git a/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.cpp b/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.cpp index bb5d72e5..c88564d4 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.cpp +++ b/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp> +#include "descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp" SISSOLogRegressor::SISSOLogRegressor( const std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp b/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp index bd54aadd..01f740cc 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp +++ b/src/descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp @@ -9,8 +9,8 @@ #ifndef SISSO_LOG_REGRESSOR #define SISSO_LOG_REGRESSOR -#include <descriptor_identifier/Model/ModelLogRegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp> +#include "descriptor_identifier/Model/ModelLogRegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; diff --git a/src/descriptor_identifier/SISSO_DI/SISSORegressor.cpp b/src/descriptor_identifier/SISSO_DI/SISSORegressor.cpp index 02363bfb..d710b5e1 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSORegressor.cpp +++ b/src/descriptor_identifier/SISSO_DI/SISSORegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp> +#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp" SISSORegressor::SISSORegressor( const std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/descriptor_identifier/SISSO_DI/SISSORegressor.hpp b/src/descriptor_identifier/SISSO_DI/SISSORegressor.hpp index 0dffca8e..265fd5d4 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSORegressor.hpp +++ b/src/descriptor_identifier/SISSO_DI/SISSORegressor.hpp @@ -9,11 +9,12 @@ #ifndef SISSO_REGRESSOR #define SISSO_REGRESSOR -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <descriptor_identifier/Model/ModelRegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp> #include <ctime> +#include "feature_creation/feature_space/FeatureSpace.hpp" +#include "descriptor_identifier/Model/ModelRegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp" + #ifdef PY_BINDINGS namespace np = boost::python::numpy; namespace py = boost::python; diff --git a/src/descriptor_identifier/SISSO_DI/SISSO_DI.cpp b/src/descriptor_identifier/SISSO_DI/SISSO_DI.cpp index bbfff6f8..7c60edf7 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSO_DI.cpp +++ b/src/descriptor_identifier/SISSO_DI/SISSO_DI.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp> +#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp" SISSO_DI::SISSO_DI( const std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/descriptor_identifier/SISSO_DI/SISSO_DI.hpp b/src/descriptor_identifier/SISSO_DI/SISSO_DI.hpp index 7b123c51..0b232ae9 100644 --- a/src/descriptor_identifier/SISSO_DI/SISSO_DI.hpp +++ b/src/descriptor_identifier/SISSO_DI/SISSO_DI.hpp @@ -9,11 +9,12 @@ #ifndef SISSO_DESCRIPTOR_ID #define SISSO_DESCRIPTOR_ID -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <descriptor_identifier/Model/Model.hpp> #include <ctime> #include <limits> +#include "feature_creation/feature_space/FeatureSpace.hpp" +#include "descriptor_identifier/Model/Model.hpp" + #ifdef PY_BINDINGS namespace np = boost::python::numpy; namespace py = boost::python; diff --git a/src/feature_creation/feature_space/FeatureSpace.cpp b/src/feature_creation/feature_space/FeatureSpace.cpp index 7c7cb9fc..3edd0b3f 100644 --- a/src/feature_creation/feature_space/FeatureSpace.cpp +++ b/src/feature_creation/feature_space/FeatureSpace.cpp @@ -1,5 +1,4 @@ -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <iomanip> +#include "feature_creation/feature_space/FeatureSpace.hpp" BOOST_CLASS_EXPORT_GUID(FeatureNode, "FeatureNode") BOOST_CLASS_EXPORT_GUID(AddNode, "AddNode") diff --git a/src/feature_creation/feature_space/FeatureSpace.hpp b/src/feature_creation/feature_space/FeatureSpace.hpp index e773d451..5b8279e8 100644 --- a/src/feature_creation/feature_space/FeatureSpace.hpp +++ b/src/feature_creation/feature_space/FeatureSpace.hpp @@ -10,16 +10,6 @@ #ifndef FEATURE_SPACE #define FEATURE_SPACE -#include <mpi_interface/MPI_Interface.hpp> -#include <mpi_interface/MPI_ops.hpp> -#include <mpi_interface/serialize_tuple.h> -#include <feature_creation/node/ModelNode.hpp> -#include <feature_creation/node/operator_nodes/allowed_ops.hpp> -#include <feature_creation/node/utils.hpp> -#include <feature_creation/node/value_storage/nodes_value_containers.hpp> -#include <utils/compare_features.hpp> -#include <utils/project.hpp> - #include <boost/serialization/shared_ptr.hpp> #include <boost/filesystem.hpp> @@ -27,6 +17,16 @@ #include <iomanip> #include <utility> +#include "mpi_interface/MPI_Interface.hpp" +#include "mpi_interface/MPI_ops.hpp" +#include "mpi_interface/serialize_tuple.h" +#include "feature_creation/node/ModelNode.hpp" +#include "feature_creation/node/operator_nodes/allowed_ops.hpp" +#include "feature_creation/node/utils.hpp" +#include "feature_creation/node/value_storage/nodes_value_containers.hpp" +#include "utils/compare_features.hpp" +#include "utils/project.hpp" + #ifdef PY_BINDINGS namespace np = boost::python::numpy; namespace py = boost::python; diff --git a/src/feature_creation/node/FeatureNode.cpp b/src/feature_creation/node/FeatureNode.cpp index 8a516bef..a5944607 100644 --- a/src/feature_creation/node/FeatureNode.cpp +++ b/src/feature_creation/node/FeatureNode.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/FeatureNode.hpp> +#include "feature_creation/node/FeatureNode.hpp" FeatureNode::FeatureNode() {} diff --git a/src/feature_creation/node/FeatureNode.hpp b/src/feature_creation/node/FeatureNode.hpp index 477e36cd..a6a1f9d1 100644 --- a/src/feature_creation/node/FeatureNode.hpp +++ b/src/feature_creation/node/FeatureNode.hpp @@ -9,16 +9,15 @@ #ifndef FEATURE_NODE #define FEATURE_NODE -#include <utils/math_funcs.hpp> -#include <utils/enum.hpp> -#include <utils/string_utils.hpp> - #include <memory> #include <boost/serialization/export.hpp> #include <boost/serialization/base_object.hpp> -#include <feature_creation/node/Node.hpp> +#include "feature_creation/node/Node.hpp" +#include "utils/math_funcs.hpp" +#include "utils/enum.hpp" +#include "utils/string_utils.hpp" #ifdef PY_BINDINGS namespace np = boost::python::numpy; @@ -81,7 +80,7 @@ public: ); #ifdef PY_BINDINGS /** - * @brief Constructs a feature node using numpy arrays (cpp definition in <python/feature_creation/FeatureNode.cpp) + * @brief Constructs a feature node using numpy arrays (cpp definition in "python/feature_creation/FeatureNode.cpp) * * @param feat_ind index of the feature * @param expr Expression for the feature @@ -92,7 +91,7 @@ public: FeatureNode(unsigned long int feat_ind, std::string expr, np::ndarray value, np::ndarray test_value, Unit unit); /** - * @brief Constructs a feature node using Python lists (cpp definition in <python/feature_creation/FeatureNode.cpp) + * @brief Constructs a feature node using Python lists (cpp definition in "python/feature_creation/FeatureNode.cpp) * * @param feat_ind index of the feature * @param expr Expression for the feature diff --git a/src/feature_creation/node/ModelNode.cpp b/src/feature_creation/node/ModelNode.cpp index d6c20df9..c23d0aa2 100644 --- a/src/feature_creation/node/ModelNode.cpp +++ b/src/feature_creation/node/ModelNode.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/ModelNode.hpp> +#include "feature_creation/node/ModelNode.hpp" ModelNode::ModelNode() {} diff --git a/src/feature_creation/node/ModelNode.hpp b/src/feature_creation/node/ModelNode.hpp index b70d0c3f..9ee722b8 100644 --- a/src/feature_creation/node/ModelNode.hpp +++ b/src/feature_creation/node/ModelNode.hpp @@ -12,9 +12,9 @@ #include <algorithm> #include <numeric> -#include <feature_creation/node/FeatureNode.hpp> -#include <feature_creation/node/operator_nodes/functions.hpp> -#include <utils/string_utils.hpp> +#include "feature_creation/node/FeatureNode.hpp" +#include "feature_creation/node/operator_nodes/functions.hpp" +#include "utils/string_utils.hpp" typedef std::pair<std::function<void(int, std::vector<double*>&)>, int> fxn_nterms_pair; // DocString: cls_model_node diff --git a/src/feature_creation/node/Node.cpp b/src/feature_creation/node/Node.cpp index 663e3122..58c6735e 100644 --- a/src/feature_creation/node/Node.cpp +++ b/src/feature_creation/node/Node.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/Node.hpp> +#include "feature_creation/node/Node.hpp" Node::Node() {} diff --git a/src/feature_creation/node/Node.hpp b/src/feature_creation/node/Node.hpp index fb1e7f06..8ec316ab 100644 --- a/src/feature_creation/node/Node.hpp +++ b/src/feature_creation/node/Node.hpp @@ -11,11 +11,6 @@ #ifndef NODE #define NODE -#include <feature_creation/node/value_storage/nodes_value_containers.hpp> -#include <feature_creation/units/Unit.hpp> -#include <utils/math_funcs.hpp> -#include <utils/enum.hpp> - #include <cmath> #include <memory> @@ -24,8 +19,13 @@ #include <boost/serialization/string.hpp> #include <boost/serialization/unique_ptr.hpp> +#include "feature_creation/node/value_storage/nodes_value_containers.hpp" +#include "feature_creation/units/Unit.hpp" +#include "utils/math_funcs.hpp" +#include "utils/enum.hpp" + #ifdef PY_BINDINGS -#include <python/conversion_utils.hpp> +#include "python/conversion_utils.hpp" namespace py = boost::python; namespace np = boost::python::numpy; #endif diff --git a/src/feature_creation/node/operator_nodes/OperatorNode.cpp b/src/feature_creation/node/operator_nodes/OperatorNode.cpp index b5a5ac2a..67690c94 100644 --- a/src/feature_creation/node/operator_nodes/OperatorNode.cpp +++ b/src/feature_creation/node/operator_nodes/OperatorNode.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(OperatorNode) diff --git a/src/feature_creation/node/operator_nodes/OperatorNode.hpp b/src/feature_creation/node/operator_nodes/OperatorNode.hpp index b699f035..f43fb81f 100644 --- a/src/feature_creation/node/operator_nodes/OperatorNode.hpp +++ b/src/feature_creation/node/operator_nodes/OperatorNode.hpp @@ -9,9 +9,7 @@ #ifndef OPERATOR_NODE #define OPERATOR_NODE -#include <feature_creation/node/Node.hpp> -#include <feature_creation/node/operator_nodes/functions.hpp> -#include <utils/math_funcs.hpp> +#include <iomanip> #include <boost/serialization/base_object.hpp> #include <boost/serialization/export.hpp> @@ -20,14 +18,16 @@ #include <boost/serialization/array.hpp> #include <boost/serialization/vector.hpp> -#include<iomanip> +#include "feature_creation/node/Node.hpp" +#include "feature_creation/node/operator_nodes/functions.hpp" +#include "utils/math_funcs.hpp" #ifdef PARAMETERIZE -#include<nl_opt/NLOptWrapper.hpp> +#include "nl_opt/NLOptWrapper.hpp" #endif #ifdef PY_BINDINGS -#include <python/conversion_utils.hpp> +#include "python/conversion_utils.hpp" namespace py = boost::python; namespace np = boost::python::numpy; diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.cpp index b1f9cd78..cd93a6fc 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(AbsNode) void generateAbsNode( diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp index 299260c6..ce655513 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp @@ -9,7 +9,7 @@ #ifndef ABS_VAL_NODE #define ABS_VAL_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_abs_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.cpp index ee580b02..4334be2c 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(AbsParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp index 06088ada..efd056fd 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_ABS_VAL_NODE #define PARAM_ABS_VAL_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.cpp index 9b1238ab..4afc56de 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.cpp @@ -1,5 +1,5 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp" void generateAbsDiffNode(std::vector<node_ptr>& feat_list, const node_ptr feat_1, const node_ptr feat_2, unsigned long int& feat_ind, const double l_bound, const double u_bound) { diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp index daf992ee..12a206c2 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp @@ -9,7 +9,7 @@ #ifndef ABS_DIFF_NODE #define ABS_DIFF_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_abs_diff_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.cpp index eedcc449..997af578 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(AbsDiffParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp index 961355ac..5d70817f 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_ABS_DIFF_NODE #define PARAM_ABS_DIFF_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.cpp index 2e3246ae..e0cd0200 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp" void generateAddNode(std::vector<node_ptr>& feat_list, const node_ptr feat_1, const node_ptr feat_2, unsigned long int& feat_ind, const double l_bound, const double u_bound) { diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp index 627121af..972d136a 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp @@ -9,7 +9,7 @@ #ifndef ADD_NODE #define ADD_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_add_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.cpp index 6d10e556..da5685af 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(AddParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp index e4846aa1..ed4d726e 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_ADD_NODE #define PARAM_ADD_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_param_add_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.cpp index 1ebbfb7c..8ad4945f 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp" void generateCbNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp index d1eb8fd0..79971943 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp @@ -9,7 +9,7 @@ #ifndef CB_NODE #define CB_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_cb_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.cpp index 3da7e1c7..ef3aad2b 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(CbParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp index 1b460923..59681406 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_CUBE_NODE #define PARAM_CUBE_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.cpp index 1c783501..d33db406 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp" void generateCbrtNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp index f88e1631..052e093f 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp @@ -9,7 +9,7 @@ #ifndef CBRT_NODE #define CBRT_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_cbrt_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.cpp index 87de55f6..3acd047e 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(CbrtParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp index c22626ca..4201f697 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_CBRT_NODE #define PARAM_CBRT_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.cpp index ae621e30..2bbcaddc 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp" void generateCosNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp index e7ee85cb..960f2472 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp @@ -9,7 +9,7 @@ #ifndef COS_NODE #define COS_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_cos_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.cpp index bf1f45fe..aa76173b 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(CosParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp index 78580aba..139c3760 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_COS_NODE #define PARAM_COS_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.cpp index f4314be4..c9dbf13d 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp" void generateDivNode(std::vector<node_ptr>& feat_list, const node_ptr feat_1, const node_ptr feat_2, unsigned long int& feat_ind, const double l_bound, const double u_bound) { diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp index 253174e2..ff752a80 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp @@ -9,7 +9,7 @@ #ifndef DIV_NODE #define DIV_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_div_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.cpp index d6460426..8b9f0103 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(DivParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp index fbe99494..188b6934 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_DIV_NODE #define PARAM_DIV_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_param_add_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.cpp index 37288b1d..a270e3ab 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp" void generateExpNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp index 2d2b5fc1..fa1e3474 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp @@ -9,7 +9,7 @@ #ifndef EXP_NODE #define EXP_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_exp_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.cpp index 282d226c..19acd707 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(ExpParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp index 4cd71ee2..4499b3e9 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_EXP_NODE #define PARAM_EXP_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.cpp index 36e476ea..1ecea585 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp" void generateInvNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp index dba801ed..1b526703 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp @@ -9,7 +9,7 @@ #ifndef INV_NODE #define INV_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_inv_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.cpp index 86953054..73511e1e 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(InvParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp index 45595da5..ce707e66 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_INV_NODE #define PARAM_INV_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.cpp index a666f6ac..06e460f1 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp" void generateLogNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp index 8029277f..b3268523 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp @@ -9,7 +9,7 @@ #ifndef LOG_NODE #define LOG_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_log_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.cpp index b7ea4ad1..7738c1b6 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(LogParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp index c41c11f8..274225cd 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_LOG_NODE #define PARAM_LOG_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.cpp index 30cbbfa8..84eb9cc5 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp" void generateMultNode(std::vector<node_ptr>& feat_list, const node_ptr feat_1, const node_ptr feat_2, unsigned long int& feat_ind, const double l_bound, const double u_bound) { diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp index 9eafb9be..4b6f278b 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp @@ -9,7 +9,7 @@ #ifndef MULT_NODE #define MULT_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_multiplication_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.cpp index aa6d0fbd..510d3e30 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(MultParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp index fc05df89..25c9ad14 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_MULT_NODE #define PARAM_MULT_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_param_add_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.cpp index 19327f8d..d41d88dd 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp" void generateNegExpNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp index 21ee3928..5410d598 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp @@ -9,7 +9,7 @@ #ifndef NEG_EXP_NODE #define NEG_EXP_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_neg_exp_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.cpp index f170303e..de461af9 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(NegExpParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp index 7fe1651b..8b5e9d2b 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_NEG_EXP_NODE #define PARAM_NEG_EXP_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.cpp index b9664df5..bbcb981b 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(SinParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp index 45bf07a4..3431a105 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_SIN_NODE #define PARAM_SIN_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.cpp index bcda5422..2e6064c9 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp" void generateSinNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp index 2e4e3a3d..50d34148 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp @@ -9,7 +9,7 @@ #ifndef SIN_NODE #define SIN_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_sin_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.cpp index c3de1828..c6802360 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(SixPowParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp index a6dcf36f..de64830c 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_SIX_POW_NODE #define PARAM_SIX_POW_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.cpp index 53bf9805..c78e3041 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp" void generateSixPowNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp index ac8dfdc6..359b71f7 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp @@ -9,7 +9,7 @@ #ifndef SIXTH_POW_NODE #define SIXTH_POW_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_six_pow_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.cpp index ad56e9db..6d28fca3 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(SqParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp index a0251406..1b6f0719 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_SQ_NODE #define PARAM_SQ_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.cpp index e856482d..0dd74faf 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp" void generateSqNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp index 6ff265f8..ece923b6 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp @@ -9,7 +9,7 @@ #ifndef SQ_NODE #define SQ_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_sq_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.cpp index 3c280fcb..3bc12241 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(SqrtParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp index d0174fc7..1aa32e35 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_SQRT_NODE #define PARAM_SQRT_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_abs_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.cpp index b7e1c34c..d6b2a091 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp" void generateSqrtNode( std::vector<node_ptr>& feat_list, diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp index c4880d43..d23a831c 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp @@ -9,7 +9,7 @@ #ifndef SQRT_NODE #define SQRT_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" #include <fmt/core.h> // DocString: cls_sqrt_node diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.cpp index b8f92391..6c747532 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp" BOOST_SERIALIZATION_ASSUME_ABSTRACT(SubParamNode) diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp index 0c4330eb..9cdfab90 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp @@ -9,8 +9,8 @@ #ifndef PARAM_SUB_NODE #define PARAM_SUB_NODE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp> -#include <nl_opt/NLOptWrapper.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp" +#include "nl_opt/NLOptWrapper.hpp" // DocString: cls_param_add_node /** diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.cpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.cpp index fcb3d971..cdae8949 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp" void generateSubNode(std::vector<node_ptr>& feat_list, const node_ptr feat_1, const node_ptr feat_2, unsigned long int& feat_ind, const double l_bound, const double u_bound) { diff --git a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp index 3631dc12..9039a971 100644 --- a/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp @@ -9,9 +9,10 @@ #ifndef SUB_NODE #define SUB_NODE -#include <feature_creation/node/operator_nodes/OperatorNode.hpp> #include <fmt/core.h> +#include "feature_creation/node/operator_nodes/OperatorNode.hpp" + // DocString: cls_sub_node /** * @brief Node for the subtraction operator diff --git a/src/feature_creation/node/operator_nodes/allowed_ops.cpp b/src/feature_creation/node/operator_nodes/allowed_ops.cpp index e5115555..2fea7d7d 100644 --- a/src/feature_creation/node/operator_nodes/allowed_ops.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_ops.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_ops.hpp> +#include "feature_creation/node/operator_nodes/allowed_ops.hpp" std::map<std::string, un_op_node_gen> allowed_op_maps::unary_operator_map; std::map<std::string, bin_op_node_gen> allowed_op_maps::binary_operator_map; diff --git a/src/feature_creation/node/operator_nodes/allowed_ops.hpp b/src/feature_creation/node/operator_nodes/allowed_ops.hpp index 8676e617..b609fbb9 100644 --- a/src/feature_creation/node/operator_nodes/allowed_ops.hpp +++ b/src/feature_creation/node/operator_nodes/allowed_ops.hpp @@ -8,41 +8,41 @@ #define ALLOWED_OP_NODES #ifdef PARAMETERIZE -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/add/parameterized_add.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/parameterized_subtract.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs/parameterized_absolute_value.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/parameterized_absolute_difference.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/mult/parameterized_multiply.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/div/parameterized_divide.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/inv/parameterized_inverse.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/exp/parameterized_exponential.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/parameterized_negative_exponential.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/log/parameterized_log.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sq/parameterized_square.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cb/parameterized_cube.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/parameterized_sixth_power.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/parameterized_square_root.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/parameterized_cube_root.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sin/parameterized_sin.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cos/parameterized_cos.hpp" #else -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp> -#include <feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp> +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/add/add.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sub/subtract.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs/absolute_value.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/abs_diff/absolute_difference.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/mult/multiply.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/div/divide.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/inv/inverse.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/exp/exponential.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/neg_exp/negative_exponential.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/log/log.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sq/square.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cb/cube.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/six_pow/sixth_power.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sqrt/square_root.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cbrt/cube_root.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/sin/sin.hpp" +#include "feature_creation/node/operator_nodes/allowed_operator_nodes/cos/cos.hpp" #endif #include <map> diff --git a/src/feature_creation/node/operator_nodes/allowed_parameter_ops.cpp b/src/feature_creation/node/operator_nodes/allowed_parameter_ops.cpp index 17fea3f1..719d6318 100644 --- a/src/feature_creation/node/operator_nodes/allowed_parameter_ops.cpp +++ b/src/feature_creation/node/operator_nodes/allowed_parameter_ops.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/operator_nodes/allowed_ops.hpp> +#include "feature_creation/node/operator_nodes/allowed_ops.hpp" std::map<std::string, un_param_op_node_gen> allowed_op_maps::unary_param_operator_map; std::map<std::string, bin_param_op_node_gen> allowed_op_maps::binary_param_operator_map; diff --git a/src/feature_creation/node/utils.cpp b/src/feature_creation/node/utils.cpp index c87aa906..cff33488 100644 --- a/src/feature_creation/node/utils.cpp +++ b/src/feature_creation/node/utils.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/utils.hpp> +#include "feature_creation/node/utils.hpp" #ifdef PARAMETERIZE void str2node::set_parameters(node_ptr feat, const std::vector<std::string> op_terms) diff --git a/src/feature_creation/node/utils.hpp b/src/feature_creation/node/utils.hpp index b3c7567d..547efe2c 100644 --- a/src/feature_creation/node/utils.hpp +++ b/src/feature_creation/node/utils.hpp @@ -8,12 +8,12 @@ #define NODE_UTILS #include <fstream> -#include <feature_creation/node/FeatureNode.hpp> -#include <feature_creation/node/ModelNode.hpp> -#include <feature_creation/node/operator_nodes/allowed_ops.hpp> -#include <feature_creation/node/value_storage/nodes_value_containers.hpp> -#include <utils/string_utils.hpp> +#include "feature_creation/node/FeatureNode.hpp" +#include "feature_creation/node/ModelNode.hpp" +#include "feature_creation/node/operator_nodes/allowed_ops.hpp" +#include "feature_creation/node/value_storage/nodes_value_containers.hpp" +#include "utils/string_utils.hpp" namespace str2node { diff --git a/src/feature_creation/node/value_storage/nodes_value_containers.cpp b/src/feature_creation/node/value_storage/nodes_value_containers.cpp index ba603c17..06b10625 100644 --- a/src/feature_creation/node/value_storage/nodes_value_containers.cpp +++ b/src/feature_creation/node/value_storage/nodes_value_containers.cpp @@ -1,5 +1,4 @@ -#include <feature_creation/node/value_storage/nodes_value_containers.hpp> -#include <iostream> +#include "feature_creation/node/value_storage/nodes_value_containers.hpp" int node_value_arrs::N_SELECTED = 0; int node_value_arrs::N_SAMPLES = 0; diff --git a/src/feature_creation/node/value_storage/nodes_value_containers.hpp b/src/feature_creation/node/value_storage/nodes_value_containers.hpp index 6f0937bf..a0b1039c 100644 --- a/src/feature_creation/node/value_storage/nodes_value_containers.hpp +++ b/src/feature_creation/node/value_storage/nodes_value_containers.hpp @@ -19,7 +19,7 @@ #include <omp.h> -#include<utils/enum.hpp> +#include"utils/enum.hpp" namespace node_value_arrs { diff --git a/src/feature_creation/units/Unit.cpp b/src/feature_creation/units/Unit.cpp index 91cf989a..72a822e0 100644 --- a/src/feature_creation/units/Unit.cpp +++ b/src/feature_creation/units/Unit.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/units/Unit.hpp> +#include "feature_creation/units/Unit.hpp" Unit::Unit() : _dct() diff --git a/src/feature_creation/units/Unit.hpp b/src/feature_creation/units/Unit.hpp index f6189df2..810885db 100644 --- a/src/feature_creation/units/Unit.hpp +++ b/src/feature_creation/units/Unit.hpp @@ -22,7 +22,7 @@ #include <boost/serialization/map.hpp> #include <boost/serialization/string.hpp> -#include <utils/string_utils.hpp> +#include "utils/string_utils.hpp" using StringRange = boost::iterator_range<std::string::const_iterator>; diff --git a/src/inputs/InputParser.cpp b/src/inputs/InputParser.cpp index 0ac618f5..d568c109 100644 --- a/src/inputs/InputParser.cpp +++ b/src/inputs/InputParser.cpp @@ -1,4 +1,4 @@ -#include <inputs/InputParser.hpp> +#include "inputs/InputParser.hpp" InputParser::InputParser(pt::ptree IP, std::string fn, std::shared_ptr<MPI_Interface> comm) : _opset(as_vector<std::string>(IP, "opset")), diff --git a/src/inputs/InputParser.hpp b/src/inputs/InputParser.hpp index e0b00ea6..39fedcad 100644 --- a/src/inputs/InputParser.hpp +++ b/src/inputs/InputParser.hpp @@ -23,8 +23,8 @@ #include <random> #include <chrono> -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <feature_creation/node/value_storage/nodes_value_containers.hpp> +#include "feature_creation/feature_space/FeatureSpace.hpp" +#include "feature_creation/node/value_storage/nodes_value_containers.hpp" namespace pt = boost::property_tree; diff --git a/src/main.cpp b/src/main.cpp index 06c0ce1f..584c2e58 100644 --- a/src/main.cpp +++ b/src/main.cpp @@ -1,18 +1,15 @@ -#include <inputs/InputParser.hpp> -#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSOClassifier.hpp> #include <iostream> -// #include <gflags/gflags.h> + +#include "inputs/InputParser.hpp" +#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSOClassifier.hpp" int main(int argc, char const *argv[]) { allowed_op_maps::set_node_maps(); #ifdef PARAMETERIZE - // google::InitGoogleLogging("XXX"); - // google::SetCommandLineOption("GLOG_minloglevel", "3"); - // google::SetCommandLineOption("stderrthreshold", "3"); allowed_op_maps::set_param_node_maps(); #endif diff --git a/src/mpi_interface/MPI_Interface.cpp b/src/mpi_interface/MPI_Interface.cpp index ad56fdb3..96b7b3af 100644 --- a/src/mpi_interface/MPI_Interface.cpp +++ b/src/mpi_interface/MPI_Interface.cpp @@ -1,4 +1,4 @@ -#include <mpi_interface/MPI_Interface.hpp> +#include "mpi_interface/MPI_Interface.hpp" MPI_Interface::MPI_Interface() : boost::mpi::communicator() {} diff --git a/src/mpi_interface/MPI_ops.cpp b/src/mpi_interface/MPI_ops.cpp index e647fc3f..543cbc48 100644 --- a/src/mpi_interface/MPI_ops.cpp +++ b/src/mpi_interface/MPI_ops.cpp @@ -1,4 +1,4 @@ -#include<mpi_interface/MPI_ops.hpp> +#include "mpi_interface/MPI_ops.hpp" // MPI_Op top_feats; std::function<bool(const double*, const int, const double, const std::vector<node_sc_pair>&, const double)> mpi_reduce_op::IS_VALID; diff --git a/src/mpi_interface/MPI_ops.hpp b/src/mpi_interface/MPI_ops.hpp index 7441e263..6a2b7ea7 100644 --- a/src/mpi_interface/MPI_ops.hpp +++ b/src/mpi_interface/MPI_ops.hpp @@ -10,8 +10,9 @@ #define SISSO_MPI_OPS #include <boost/mpi.hpp> -#include <feature_creation/node/Node.hpp> -#include <utils/compare_features.hpp> + +#include "feature_creation/node/Node.hpp" +#include "utils/compare_features.hpp" namespace mpi_reduce_op { diff --git a/src/nl_opt/NLOptWrapper.cpp b/src/nl_opt/NLOptWrapper.cpp index 9487dcdf..cd258a6c 100644 --- a/src/nl_opt/NLOptWrapper.cpp +++ b/src/nl_opt/NLOptWrapper.cpp @@ -1,4 +1,5 @@ -#include <nl_opt/NLOptWrapper.hpp> +#include "nl_opt/NLOptWrapper.hpp" + int nlopt_wrapper::MAX_PARAM_DEPTH = -1; NLOptimizer::NLOptimizer( const std::vector<int>& task_sizes, diff --git a/src/nl_opt/NLOptWrapper.hpp b/src/nl_opt/NLOptWrapper.hpp index f288cfdd..f262e5f3 100644 --- a/src/nl_opt/NLOptWrapper.hpp +++ b/src/nl_opt/NLOptWrapper.hpp @@ -8,8 +8,8 @@ #define NL_OPT_WRAPPER #include <nlopt.hpp> -#include <feature_creation/node/Node.hpp> -#include <classification/ConvexHull1D.hpp> +#include "feature_creation/node/Node.hpp" +#include "classification/ConvexHull1D.hpp" class NLOptimizer { diff --git a/src/python/bindings_docstring_keyed.cpp b/src/python/bindings_docstring_keyed.cpp index 91ddcc9c..f2810228 100644 --- a/src/python/bindings_docstring_keyed.cpp +++ b/src/python/bindings_docstring_keyed.cpp @@ -1,4 +1,4 @@ -#include <python/bindings.hpp> +#include "python/bindings.hpp" using namespace boost::python; diff --git a/src/python/bindings_docstring_keyed.hpp b/src/python/bindings_docstring_keyed.hpp index c459f2fa..1bded860 100644 --- a/src/python/bindings_docstring_keyed.hpp +++ b/src/python/bindings_docstring_keyed.hpp @@ -7,13 +7,13 @@ #ifndef PYTHON_BINDING #define PYTHON_BINDINGS -#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp> -#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp> -#include <descriptor_identifier/SISSO_DI/SISSOClassifier.hpp> -#include <feature_creation/feature_space/FeatureSpace.hpp> -#include <nl_opt/NLOptWrapper.hpp> -#include <python/feature_creation/node_utils.hpp> +#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp" +#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp" +#include "descriptor_identifier/SISSO_DI/SISSOClassifier.hpp" +#include "feature_creation/feature_space/FeatureSpace.hpp" +#include "nl_opt/NLOptWrapper.hpp" +#include "python/feature_creation/node_utils.hpp" namespace py = boost::python; namespace np = boost::python::numpy; diff --git a/src/python/conversion_utils.hpp b/src/python/conversion_utils.hpp index 28494302..94898cf9 100644 --- a/src/python/conversion_utils.hpp +++ b/src/python/conversion_utils.hpp @@ -9,13 +9,13 @@ #include <algorithm> #include <array> +#include <iostream> +#include <map> #include <vector> + #include <boost/python.hpp> #include <boost/python/numpy.hpp> -#include <iostream> -#include <map> - namespace python_conv_utils { namespace py = boost::python; diff --git a/src/python/descriptor_identifier/Model.cpp b/src/python/descriptor_identifier/Model.cpp index 2af0586f..d1778521 100644 --- a/src/python/descriptor_identifier/Model.cpp +++ b/src/python/descriptor_identifier/Model.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/Model.hpp> +#include "descriptor_identifier/Model/Model.hpp" np::ndarray Model::eval_many_py(np::ndarray x_in) const { diff --git a/src/python/descriptor_identifier/ModelClassifier.cpp b/src/python/descriptor_identifier/ModelClassifier.cpp index d5a0555f..a6dd3c52 100644 --- a/src/python/descriptor_identifier/ModelClassifier.cpp +++ b/src/python/descriptor_identifier/ModelClassifier.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/Model/ModelClassifier.hpp> +#include "descriptor_identifier/Model/ModelClassifier.hpp" ModelClassifier::ModelClassifier(const ModelClassifier& o, py::list new_coefs, np::ndarray prop_train_est, np::ndarray prop_test_est) : Model(o), diff --git a/src/python/descriptor_identifier/SISSOClassifier.cpp b/src/python/descriptor_identifier/SISSOClassifier.cpp index ce949e2a..a4857b06 100644 --- a/src/python/descriptor_identifier/SISSOClassifier.cpp +++ b/src/python/descriptor_identifier/SISSOClassifier.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSOClassifier.hpp> +#include "descriptor_identifier/SISSO_DI/SISSOClassifier.hpp" SISSOClassifier::SISSOClassifier( std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/python/descriptor_identifier/SISSOLogRegressor.cpp b/src/python/descriptor_identifier/SISSOLogRegressor.cpp index 97b56c24..97ff8ad1 100644 --- a/src/python/descriptor_identifier/SISSOLogRegressor.cpp +++ b/src/python/descriptor_identifier/SISSOLogRegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp> +#include "descriptor_identifier/SISSO_DI/SISSOLogRegressor.hpp" SISSOLogRegressor::SISSOLogRegressor( std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/python/descriptor_identifier/SISSORegressor.cpp b/src/python/descriptor_identifier/SISSORegressor.cpp index 2b88aa10..98c507d1 100644 --- a/src/python/descriptor_identifier/SISSORegressor.cpp +++ b/src/python/descriptor_identifier/SISSORegressor.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSORegressor.hpp> +#include "descriptor_identifier/SISSO_DI/SISSORegressor.hpp" SISSORegressor::SISSORegressor( std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/python/descriptor_identifier/SISSO_DI.cpp b/src/python/descriptor_identifier/SISSO_DI.cpp index c7920cc4..4d8998cb 100644 --- a/src/python/descriptor_identifier/SISSO_DI.cpp +++ b/src/python/descriptor_identifier/SISSO_DI.cpp @@ -1,4 +1,4 @@ -#include <descriptor_identifier/SISSO_DI/SISSO_DI.hpp> +#include "descriptor_identifier/SISSO_DI/SISSO_DI.hpp" SISSO_DI::SISSO_DI( std::shared_ptr<FeatureSpace> feat_space, diff --git a/src/python/feature_creation/FeatureNode.cpp b/src/python/feature_creation/FeatureNode.cpp index d4c84529..998e720c 100644 --- a/src/python/feature_creation/FeatureNode.cpp +++ b/src/python/feature_creation/FeatureNode.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/FeatureNode.hpp> +#include "feature_creation/node/FeatureNode.hpp" FeatureNode::FeatureNode(unsigned long int feat_ind, std::string expr, np::ndarray value, np::ndarray test_value, Unit unit) : Node(feat_ind, value.shape(0), test_value.shape(0)), diff --git a/src/python/feature_creation/FeatureSpace.cpp b/src/python/feature_creation/FeatureSpace.cpp index 1bf62188..15be757a 100644 --- a/src/python/feature_creation/FeatureSpace.cpp +++ b/src/python/feature_creation/FeatureSpace.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/feature_space/FeatureSpace.hpp> +#include "feature_creation/feature_space/FeatureSpace.hpp" #ifdef PARAMETERIZE FeatureSpace::FeatureSpace( diff --git a/src/python/feature_creation/ModelNode.cpp b/src/python/feature_creation/ModelNode.cpp index f98ed0e5..e48203c3 100644 --- a/src/python/feature_creation/ModelNode.cpp +++ b/src/python/feature_creation/ModelNode.cpp @@ -1,4 +1,4 @@ -#include <feature_creation/node/ModelNode.hpp> +#include "feature_creation/node/ModelNode.hpp" np::ndarray ModelNode::eval_many_py(np::ndarray x_in) { diff --git a/src/python/feature_creation/node_utils.cpp b/src/python/feature_creation/node_utils.cpp index 5411a1d0..bd844593 100644 --- a/src/python/feature_creation/node_utils.cpp +++ b/src/python/feature_creation/node_utils.cpp @@ -1,4 +1,4 @@ -#include <python/feature_creation/node_utils.hpp> +#include "python/feature_creation/node_utils.hpp" py::list str2node::phi_selected_from_file_py(std::string filename, py::list phi_0) { diff --git a/src/python/feature_creation/node_utils.hpp b/src/python/feature_creation/node_utils.hpp index 5d3d7e9a..149e3e3d 100644 --- a/src/python/feature_creation/node_utils.hpp +++ b/src/python/feature_creation/node_utils.hpp @@ -7,7 +7,7 @@ #ifndef NODE_UTILS_PY #define NODE_UTILS_PY -#include <feature_creation/node/utils.hpp> +#include "feature_creation/node/utils.hpp" namespace py = boost::python; @@ -25,4 +25,4 @@ namespace str2node py::list phi_selected_from_file_py(std::string filename, py::list phi_0); } -#endif \ No newline at end of file +#endif diff --git a/src/utils/compare_features.cpp b/src/utils/compare_features.cpp index eb991c72..024ec5bb 100644 --- a/src/utils/compare_features.cpp +++ b/src/utils/compare_features.cpp @@ -1,4 +1,4 @@ -#include <utils/compare_features.hpp> +#include "utils/compare_features.hpp" std::vector<double> comp_feats::CORR_CHECK; std::vector<double> comp_feats::RANK; std::vector<int> comp_feats::INDEX; diff --git a/src/utils/compare_features.hpp b/src/utils/compare_features.hpp index d21d806c..955fa397 100644 --- a/src/utils/compare_features.hpp +++ b/src/utils/compare_features.hpp @@ -9,7 +9,7 @@ #include <tuple> -#include <feature_creation/node/Node.hpp> +#include "feature_creation/node/Node.hpp" typedef std::tuple<node_ptr, double> node_sc_pair; diff --git a/src/utils/math_funcs.cpp b/src/utils/math_funcs.cpp index b853a0e2..1efd66c1 100644 --- a/src/utils/math_funcs.cpp +++ b/src/utils/math_funcs.cpp @@ -1,4 +1,4 @@ -#include <utils/math_funcs.hpp> +#include "utils/math_funcs.hpp" bool util_funcs::iterate(std::vector<int>& inds, int size, int incriment) { diff --git a/src/utils/math_funcs.hpp b/src/utils/math_funcs.hpp index c5051634..80ccd010 100644 --- a/src/utils/math_funcs.hpp +++ b/src/utils/math_funcs.hpp @@ -9,12 +9,12 @@ #include <algorithm> #include <functional> +#include <iostream> #include <numeric> #include <vector> #include <math.h> -#include <utils/mkl_interface.hpp> -#include<iostream> +#include "utils/mkl_interface.hpp" namespace util_funcs { diff --git a/src/utils/project.cpp b/src/utils/project.cpp index c79fb028..376e9bbf 100644 --- a/src/utils/project.cpp +++ b/src/utils/project.cpp @@ -1,4 +1,4 @@ -#include <utils/project.hpp> +#include "utils/project.hpp" void project_funcs::set_project_fxn( const std::string project_type, diff --git a/src/utils/project.hpp b/src/utils/project.hpp index 1ddf020a..f3ac9151 100644 --- a/src/utils/project.hpp +++ b/src/utils/project.hpp @@ -11,10 +11,10 @@ #include <iostream> #include <omp.h> -#include <classification/ConvexHull1D.hpp> -#include <feature_creation/node/Node.hpp> +#include "classification/ConvexHull1D.hpp" +#include "feature_creation/node/Node.hpp" #ifdef PARAMETERIZE -#include <nl_opt/NLOptWrapper.hpp> +#include "nl_opt/NLOptWrapper.hpp" #endif namespace project_funcs diff --git a/src/utils/string_utils.cpp b/src/utils/string_utils.cpp index 7fd20aa7..e7b71b8c 100644 --- a/src/utils/string_utils.cpp +++ b/src/utils/string_utils.cpp @@ -1,4 +1,4 @@ -#include <utils/string_utils.hpp> +#include "utils/string_utils.hpp" std::vector<std::string> str_utils::split_string_trim(const std::string str, const std::string split_tokens) { -- GitLab