Skip to content
GitLab
Menu
Projects
Groups
Snippets
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
Lucas Miranda
deepOF
Commits
1de3d9b9
Commit
1de3d9b9
authored
Jan 21, 2021
by
lucas_miranda
Browse files
Updated pipfile.lock
parent
438e6a57
Pipeline
#91875
failed with stage
in 12 minutes and 31 seconds
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
deepof_experiments.smk
View file @
1de3d9b9
...
...
@@ -16,7 +16,7 @@ import os
outpath = "/u/lucasmir/DLC/DLC_autoencoders/DeepOF/deepof/logs/"
losses = ["ELBO"] # , "MMD", "ELBO+MMD"]
encodings = [4, 6, 8] # [2, 4, 6, 8, 10, 12, 14, 16]
cluster_numbers = [10, 15] # [1, 5, 10, 15, 20]
cluster_numbers = [10, 15
, 20
] # [1, 5, 10, 15, 20]
pheno_weights = [0.01, 0.1, 0.25, 0.5, 1.0, 2.0, 4.0, 10.0, 100.0]
...
...
@@ -29,14 +29,14 @@ rule deepof_experiments:
encs=encodings,
k=cluster_numbers,
),
expand(
"/u/lucasmir/DLC/DLC_autoencoders/DeepOF/deepof/logs/pheno_classification_experiments/trained_weights/"
"GMVAE_loss={loss}_encoding={encs}_k={k}_pheno={phenos}_run_1_final_weights.h5",
loss=losses,
encs=encodings,
k=cluster_numbers,
phenos=pheno_weights,
),
#
expand(
#
"/u/lucasmir/DLC/DLC_autoencoders/DeepOF/deepof/logs/pheno_classification_experiments/trained_weights/"
#
"GMVAE_loss={loss}_encoding={encs}_k={k}_pheno={phenos}_run_1_final_weights.h5",
#
loss=losses,
#
encs=encodings,
#
k=cluster_numbers,
#
phenos=pheno_weights,
#
),
# rule coarse_hyperparameter_tuning:
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment