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New command line interface for struphy

Stefan Possanner requested to merge cobra_doc into devel
  • Type "struphy" to display help
  • New commands "struphy run [model] [run options]" and "struphy compile [compile options]"
  • "-e" and "--user" flags available
  • Specification of absolute paths possible
  • Slurm batch script run enabled.
  • MPI run enabled.

Other:

  • Removed numpy version requirement from setup.
  • Fixed some openmp issues in cc_cold_plasma.
  • Set write mode "w" when initiating hdf5 file, automatically deleting if file exists (no restarts possible yet)
  • Updated doc and README
Edited by Stefan Possanner

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