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nomad-lab
python-common
Commits
2d5181f5
Commit
2d5181f5
authored
9 years ago
by
Mohamed, Fawzi Roberto (fawzi)
Browse files
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adding onOpen to make getting hold of gIndex simpler (no adHoc)
parent
5e6c5337
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Changes
2
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2 changed files
common/python/nomadcore/caching_backend.py
+18
-4
18 additions, 4 deletions
common/python/nomadcore/caching_backend.py
common/python/nomadcore/simple_parser.py
+26
-0
26 additions, 0 deletions
common/python/nomadcore/simple_parser.py
with
44 additions
and
4 deletions
common/python/nomadcore/caching_backend.py
+
18
−
4
View file @
2d5181f5
...
@@ -132,12 +132,13 @@ class CachingSection(object):
...
@@ -132,12 +132,13 @@ class CachingSection(object):
class
CachingSectionManager
(
object
):
class
CachingSectionManager
(
object
):
def
__init__
(
self
,
metaInfo
,
parentSectionNames
,
lastSectionGIndex
=
-
1
,
openSections
=
{},
onClose
=
[],
storeInSuper
=
False
,
forwardOpenClose
=
True
):
def
__init__
(
self
,
metaInfo
,
parentSectionNames
,
lastSectionGIndex
=
-
1
,
openSections
=
{},
onClose
=
[],
onOpen
=
[],
storeInSuper
=
False
,
forwardOpenClose
=
True
):
self
.
metaInfo
=
metaInfo
self
.
metaInfo
=
metaInfo
self
.
parentSectionNames
=
parentSectionNames
self
.
parentSectionNames
=
parentSectionNames
self
.
lastSectionGIndex
=
lastSectionGIndex
self
.
lastSectionGIndex
=
lastSectionGIndex
self
.
openSections
=
dict
(
openSections
)
self
.
openSections
=
dict
(
openSections
)
self
.
onClose
=
list
(
onClose
)
self
.
onClose
=
list
(
onClose
)
self
.
onOpen
=
list
(
onOpen
)
self
.
storeInSuper
=
storeInSuper
self
.
storeInSuper
=
storeInSuper
self
.
forwardOpenClose
=
forwardOpenClose
self
.
forwardOpenClose
=
forwardOpenClose
...
@@ -158,7 +159,10 @@ class CachingSectionManager(object):
...
@@ -158,7 +159,10 @@ class CachingSectionManager(object):
references
.
append
(
pSect
.
lastSectionGIndex
)
references
.
append
(
pSect
.
lastSectionGIndex
)
else
:
else
:
references
.
append
(
-
1
)
references
.
append
(
-
1
)
self
.
openSections
[
gIndex
]
=
CachingSection
(
gIndex
,
references
,
storeInSuper
=
self
.
storeInSuper
,
activeBackend
=
backend
)
opened
=
CachingSection
(
gIndex
,
references
,
storeInSuper
=
self
.
storeInSuper
,
activeBackend
=
backend
)
self
.
openSections
[
gIndex
]
=
opened
for
onOpenF
in
self
.
onOpen
:
onOpenF
(
backend
,
gIndex
,
opened
)
def
closeSection
(
self
,
backend
,
gIndex
):
def
closeSection
(
self
,
backend
,
gIndex
):
toClose
=
self
.
openSections
[
gIndex
]
toClose
=
self
.
openSections
[
gIndex
]
...
@@ -236,13 +240,19 @@ class ActiveBackend(object):
...
@@ -236,13 +240,19 @@ class ActiveBackend(object):
@classmethod
@classmethod
def
activeBackend
(
cls
,
metaInfoEnv
,
cachingLevelForMetaName
=
{},
defaultDataCachingLevel
=
CachingLevel
.
ForwardAndCache
,
defaultSectionCachingLevel
=
CachingLevel
.
Forward
,
superBackend
=
None
,
def
activeBackend
(
cls
,
metaInfoEnv
,
cachingLevelForMetaName
=
{},
defaultDataCachingLevel
=
CachingLevel
.
ForwardAndCache
,
defaultSectionCachingLevel
=
CachingLevel
.
Forward
,
superBackend
=
None
,
onClose
=
{},
propagateStartFinishParsing
=
True
,
default_units
=
None
,
metainfo_units
=
None
):
onClose
=
{},
onOpen
=
{},
propagateStartFinishParsing
=
True
,
default_units
=
None
,
metainfo_units
=
None
):
for
sectionName
in
onClose
.
keys
():
for
sectionName
in
onClose
.
keys
():
if
not
sectionName
in
metaInfoEnv
:
if
not
sectionName
in
metaInfoEnv
:
raise
Exception
(
"
Found trigger for non existing section %s
"
%
sectionName
)
raise
Exception
(
"
Found trigger for non existing section %s
"
%
sectionName
)
elif
metaInfoEnv
.
infoKinds
[
sectionName
].
kindStr
!=
"
type_section
"
:
elif
metaInfoEnv
.
infoKinds
[
sectionName
].
kindStr
!=
"
type_section
"
:
raise
Exception
(
"
Found trigger for %s which is not a section but %s
"
%
raise
Exception
(
"
Found trigger for %s which is not a section but %s
"
%
(
sectionName
,
json
.
dumps
(
metaInfoEnv
.
infoKinds
[
sectionName
].
toDict
(),
indent
=
2
)))
(
sectionName
,
json
.
dumps
(
metaInfoEnv
.
infoKinds
[
sectionName
].
toDict
(),
indent
=
2
)))
for
sectionName
in
onOpen
.
keys
():
if
not
sectionName
in
metaInfoEnv
:
raise
Exception
(
"
Found trigger for non existing section %s
"
%
sectionName
)
elif
metaInfoEnv
.
infoKinds
[
sectionName
].
kindStr
!=
"
type_section
"
:
raise
Exception
(
"
Found trigger for %s which is not a section but %s
"
%
(
sectionName
,
json
.
dumps
(
metaInfoEnv
.
infoKinds
[
sectionName
].
toDict
(),
indent
=
2
)))
sectionManagers
=
{}
sectionManagers
=
{}
for
ikNames
,
ik
in
metaInfoEnv
.
infoKinds
.
items
():
for
ikNames
,
ik
in
metaInfoEnv
.
infoKinds
.
items
():
if
ik
.
kindStr
==
"
type_section
"
:
if
ik
.
kindStr
==
"
type_section
"
:
...
@@ -254,7 +264,8 @@ class ActiveBackend(object):
...
@@ -254,7 +264,8 @@ class ActiveBackend(object):
parentSectionNames
=
parentS
,
parentSectionNames
=
parentS
,
storeInSuper
=
(
cachingLevel
==
CachingLevel
.
ForwardAndCache
or
cachingLevel
==
CachingLevel
.
Cache
),
storeInSuper
=
(
cachingLevel
==
CachingLevel
.
ForwardAndCache
or
cachingLevel
==
CachingLevel
.
Cache
),
forwardOpenClose
=
(
cachingLevel
==
CachingLevel
.
Forward
or
cachingLevel
==
CachingLevel
.
ForwardAndCache
),
forwardOpenClose
=
(
cachingLevel
==
CachingLevel
.
Forward
or
cachingLevel
==
CachingLevel
.
ForwardAndCache
),
onClose
=
onClose
.
get
(
ik
.
name
,
[]))
onClose
=
onClose
.
get
(
ik
.
name
,
[]),
onOpen
=
onOpen
.
get
(
ik
.
name
,
[]))
dataManagers
=
{}
dataManagers
=
{}
for
ikNames
,
ik
in
metaInfoEnv
.
infoKinds
.
items
():
for
ikNames
,
ik
in
metaInfoEnv
.
infoKinds
.
items
():
if
ik
.
kindStr
==
"
type_document_content
"
or
ik
.
kindStr
==
"
type_dimension
"
:
if
ik
.
kindStr
==
"
type_document_content
"
or
ik
.
kindStr
==
"
type_dimension
"
:
...
@@ -271,6 +282,9 @@ class ActiveBackend(object):
...
@@ -271,6 +282,9 @@ class ActiveBackend(object):
def
appendOnClose
(
self
,
sectionName
,
onClose
):
def
appendOnClose
(
self
,
sectionName
,
onClose
):
self
.
sectionManagers
.
onClose
.
append
(
onClose
)
self
.
sectionManagers
.
onClose
.
append
(
onClose
)
def
appendOnOpen
(
self
,
sectionName
,
onOpen
):
self
.
sectionManagers
.
onOpen
.
append
(
onOpen
)
def
storeToClosedSuper
(
self
,
superName
,
superGIndex
,
metaInfo
,
toClose
):
def
storeToClosedSuper
(
self
,
superName
,
superGIndex
,
metaInfo
,
toClose
):
logging
.
getLogger
(
"
nomadcore.caching_backend
"
).
warn
(
logging
.
getLogger
(
"
nomadcore.caching_backend
"
).
warn
(
"
Dropping section {name} gIndex {gIndex}, as it cannot be added to closed super section {superName} gIndex: {superGIndex}
"
.
format
(
"
Dropping section {name} gIndex {gIndex}, as it cannot be added to closed super section {superName} gIndex: {superGIndex}
"
.
format
(
...
...
This diff is collapsed.
Click to expand it.
common/python/nomadcore/simple_parser.py
+
26
−
0
View file @
2d5181f5
...
@@ -672,6 +672,19 @@ def extractOnCloseTriggers(obj):
...
@@ -672,6 +672,19 @@ def extractOnCloseTriggers(obj):
triggers
[
name
]
=
getattr
(
obj
,
attr
)
triggers
[
name
]
=
getattr
(
obj
,
attr
)
return
triggers
return
triggers
def
extractOnOpenTriggers
(
obj
):
"""
extracts all triggers from the object obj
triggers should start with onOpen_ and then have a valid section name.
They will be called with backend, gIndex and the section that is being closed
(of type CachingSection)
"""
triggers
=
{}
for
attr
in
dir
(
obj
):
if
attr
.
startswith
(
"
onOpen_
"
):
name
=
attr
[
7
:]
triggers
[
name
]
=
getattr
(
obj
,
attr
)
return
triggers
class
SimpleParserBuilder
(
object
):
class
SimpleParserBuilder
(
object
):
def
__init__
(
self
,
rootMatcher
,
metaInfoEnv
,
metaInfoToKeep
=
None
,
default_units
=
None
,
metainfo_units
=
None
):
def
__init__
(
self
,
rootMatcher
,
metaInfoEnv
,
metaInfoToKeep
=
None
,
default_units
=
None
,
metainfo_units
=
None
):
"""
"""
...
@@ -1068,6 +1081,7 @@ def mainFunction(mainFileDescription,
...
@@ -1068,6 +1081,7 @@ def mainFunction(mainFileDescription,
defaultSectionCachingLevel
=
CachingLevel
.
Forward
,
defaultSectionCachingLevel
=
CachingLevel
.
Forward
,
superContext
=
None
,
superContext
=
None
,
onClose
=
{},
onClose
=
{},
onOpen
=
{},
default_units
=
None
,
default_units
=
None
,
metainfo_units
=
None
,
metainfo_units
=
None
,
superBackend
=
None
,
superBackend
=
None
,
...
@@ -1177,12 +1191,20 @@ def mainFunction(mainFileDescription,
...
@@ -1177,12 +1191,20 @@ def mainFunction(mainFileDescription,
oldCallbacks
.
append
(
callback
)
oldCallbacks
.
append
(
callback
)
else
:
else
:
onClose
[
attr
]
=
[
callback
]
onClose
[
attr
]
=
[
callback
]
onOpen
=
dict
(
onOpen
)
for
attr
,
callback
in
extractOnOpenTriggers
(
superContext
).
items
():
oldCallbacks
=
onOpen
.
get
(
attr
,
None
)
if
oldCallbacks
:
oldCallbacks
.
append
(
callback
)
else
:
onOpen
[
attr
]
=
[
callback
]
backend
=
ActiveBackend
.
activeBackend
(
backend
=
ActiveBackend
.
activeBackend
(
metaInfoEnv
=
metaInfoEnv
,
metaInfoEnv
=
metaInfoEnv
,
cachingLevelForMetaName
=
cachingLevelForMetaName
,
cachingLevelForMetaName
=
cachingLevelForMetaName
,
defaultDataCachingLevel
=
defaultDataCachingLevel
,
defaultDataCachingLevel
=
defaultDataCachingLevel
,
defaultSectionCachingLevel
=
defaultSectionCachingLevel
,
defaultSectionCachingLevel
=
defaultSectionCachingLevel
,
onClose
=
onClose
,
onClose
=
onClose
,
onOpen
=
onOpen
,
superBackend
=
jsonBackend
,
superBackend
=
jsonBackend
,
default_units
=
default_units
,
default_units
=
default_units
,
metainfo_units
=
metainfo_units
)
metainfo_units
=
metainfo_units
)
...
@@ -1240,11 +1262,15 @@ class AncillaryParser(object):
...
@@ -1240,11 +1262,15 @@ class AncillaryParser(object):
onClose
=
{}
onClose
=
{}
for
attr
,
callback
in
extractOnCloseTriggers
(
superContext
).
items
():
for
attr
,
callback
in
extractOnCloseTriggers
(
superContext
).
items
():
onClose
[
attr
]
=
[
callback
]
onClose
[
attr
]
=
[
callback
]
onOpen
=
{}
for
attr
,
callback
in
extractOnOpenTriggers
(
superContext
).
items
():
onOpen
[
attr
]
=
[
callback
]
# create backend for parser
# create backend for parser
self
.
backend
=
ActiveBackend
.
activeBackend
(
self
.
backend
=
ActiveBackend
.
activeBackend
(
metaInfoEnv
=
parser
.
parserBuilder
.
metaInfoEnv
,
metaInfoEnv
=
parser
.
parserBuilder
.
metaInfoEnv
,
cachingLevelForMetaName
=
cachingLevelForMetaName
,
cachingLevelForMetaName
=
cachingLevelForMetaName
,
onClose
=
onClose
,
onClose
=
onClose
,
onOpen
=
onOpen
,
superBackend
=
parser
.
backend
.
superBackend
,
superBackend
=
parser
.
backend
.
superBackend
,
propagateStartFinishParsing
=
False
,
# write no parser info upon start and end of parsing
propagateStartFinishParsing
=
False
,
# write no parser info upon start and end of parsing
default_units
=
default_units
,
default_units
=
default_units
,
...
...
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