Reactivated abtem after relocation

Dockerfile

@@ -23,37 +23,32 @@ RUN mkdir -p /home \
   && mkdir -p /home/gpaw \
   && mkdir -p /home/abtem
 
-COPY Cheatsheet.ipynb FAIRmat_S.png /home/
+COPY Cheatsheet.ipynb FAIRmatNewLogo.png NOMADOasisLogo.png /home/
 COPY 02-exec-cmd /config/custom-cont-init.d/02-exec-cmd
 
 # install operating system dependencies
 RUN apt update \
-  && apt-get install -y \
-  git=1:2.25.1-1ubuntu3.11 cmake=3.16.3-1ubuntu1.20.04.1 \
-  unzip=6.0-25ubuntu1 wget=1.20.3-1ubuntu2 libgtk-3-dev=3.24.20-0ubuntu1.1 \
-  build-essential=12.8ubuntu1.1\
-  libglu1-mesa-dev=9.0.1-1build1 libblas-dev=3.9.0-1build1 \
-  liblapack-dev=3.9.0-1build1 libxc-dev=4.3.4-1build1 \
+  && apt-get install -y git cmake unzip wget libgtk-3-dev build-essential libglu1-mesa-dev=9.0.1-1build1 libblas-dev liblapack-dev libxc-dev \
   && wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh \
   && chmod +x Miniconda3-latest-Linux-x86_64.sh \
   && bash ./Miniconda3-latest-Linux-x86_64.sh -b -p /usr/local/miniconda3 \
   && rm -f Miniconda3-latest-Linux-x86_64.sh \
   && cd /home \
   && conda config --add channels conda-forge \
-  && conda config --set channel_priority strict \
-  && conda install python=3.10.6 ipykernel=6.16.0 jupyterlab=3.4.7 nodejs=18.9.0 \
-  && pip install jupyterlab_h5web[full]==6.0.1 \
-  && pip install gpaw \
-  && pip install abtem \
+  && conda install python jupyter jupyterlab jupyterlab-h5web gpaw abtem \
   && conda clean -afy \
-  && chown -R ${PUID}:${PGID} /usr/local/miniconda3 \
+  && python -m pip install --upgrade pip \
   && cd /home/vesta \
-  && wget https://jp-minerals.org/vesta/archives/3.5.7/VESTA-gtk3.tar.bz2 \
+  && wget https://jp-minerals.org/vesta/archives/3.5.8/VESTA-gtk3.tar.bz2 \
   && tar -xvf VESTA-gtk3.tar.bz2 \
   && rm -f VESTA-gtk3.tar.bz2 \
+  && chown -R ${PUID}:${PGID} /usr/local/miniconda3 \
   && chown -R ${PUID}:${PGID} /home
 
 WORKDIR /home
 
+
+# comments to ignore
 # how to call this container for development purposes for example
 # docker run -p 3000:8888 ewr-abinit-em-webtop
+# && conda config --set channel_priority strict \