Exception while parsing QuantumEspresso
This happens to at least 7k calculations.
This would be an example calculation that exhibits this problem: https://repository.nomad-coe.eu/app/gui/entry/id/yp1lMBfsQRq8DcM--ulO_Q/fviLxuCSF-6gNq70c-1zfA7eQUJZ
This is the stacktrace:
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 286, in parsing
self.upload_files.raw_file_object(self.mainfile).os_path, logger=logger)
File "/app/nomad/parsing/parser.py", line 205, in run
backend = self.parser.parse(mainfile)
File "/usr/local/lib/python3.6/site-packages/quantumespressoparser/QuantumEspressoCommon.py", line 128, in parse
mainFile=mainfile)
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1598, in mainFunction
parseFile(parserBuilder, uri, fileToParse, backend, superContext)
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1415, in parseF
parserBuilder, backend, superContext, fIn, uri, path)
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1405, in runParser
parser.parse()
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1360, in parse
while self.parseStep():
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1347, in parseStep
self.goToMatcher(matcherNew, startEnd)
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1321, in goToMatcher
self.enterInState(tMatcher.index)
File "/usr/local/lib/python3.6/site-packages/nomadcore/simple_parser.py", line 1236, in enterInState
gIndex = self.backend.openSection(s)
File "/usr/local/lib/python3.6/site-packages/nomadcore/caching_backend.py", line 388, in openSection
manager.openSectionWithGIndex(self, newGIndex)
File "/usr/local/lib/python3.6/site-packages/nomadcore/caching_backend.py", line 204, in openSectionWithGIndex
onOpenF(backend, gIndex, opened)
File "/usr/local/lib/python3.6/site-packages/quantumespressoparser/parser_quantum_espresso.py", line 254, in onOpen_section_single_configuration_calculation
raise Exception('encountered new section_single_configuration_calculation without knowing why')
Exception: encountered new section_single_configuration_calculation without knowing why