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Commit b3a6d40f authored by Ahmed Ilyas's avatar Ahmed Ilyas
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update requirements

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Pipeline #186295 passed
Stage: build
Stage: test
Stage: deploy
Stage: release
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requirements-dev.txt
+ 21
− 25
View file @ b3a6d40f
......@@ -2,7 +2,7 @@
# This file is autogenerated by pip-compile with Python 3.9
# by the following command:
#
# pip-compile --annotation-style=line --extra=dev --extra=infrastructure --extra=parsing --output-file=requirements-dev.txt --resolver=backtracking dependencies/matid/pyproject.toml dependencies/nomad-dos-fingerprints/pyproject.toml dependencies/parsers/atomistic/pyproject.toml dependencies/parsers/database/pyproject.toml dependencies/parsers/eelsdb/pyproject.toml dependencies/parsers/electronic/pyproject.toml dependencies/parsers/nexus/pyproject.toml dependencies/parsers/workflow/pyproject.toml pyproject.toml requirements.txt
# pip-compile --annotation-style=line --extra=dev --extra=infrastructure --extra=parsing --output-file=requirements-dev.txt --resolver=backtracking pyproject.toml requirements.txt
#
aiosmtpd==1.4.4.post2 # via nomad-lab (pyproject.toml)
alabaster==0.7.12 # via -r requirements.txt, sphinx
......@@ -84,7 +84,7 @@ fastapi==0.92.0 # via -r requirements.txt, h5grove, nomad-lab (pyproje
fasteners==0.18 # via -r requirements.txt, mdanalysis, zarr
filelock==3.3.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
flask==2.2.2 # via -r requirements.txt, asr
flatdict==4.0.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
flatdict==4.0.1 # via -r requirements.txt
fonttools==4.38.0 # via -r requirements.txt, matplotlib
fqdn==1.5.1 # via -r requirements.txt, jsonschema
fsspec==2022.11.0 # via -r requirements.txt, dask, hyperspy
......@@ -104,9 +104,9 @@ html5lib==1.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
httpcore==0.16.3 # via -r requirements.txt, httpx
httptools==0.5.0 # via -r requirements.txt, uvicorn
httpx==0.23.3 # via -r requirements.txt, nomad-lab (pyproject.toml)
hyperspy==1.7.5 # via -r requirements.txt, kikuchipy, pynxtools (dependencies/parsers/nexus/pyproject.toml), pyxem
hyperspy==1.7.5 # via -r requirements.txt, kikuchipy, pyxem
idna==3.4 # via -r requirements.txt, anyio, email-validator, jsonschema, requests, rfc3986
ifes-apt-tc-data-modeling==0.0.9 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
ifes-apt-tc-data-modeling==0.0.9 # via -r requirements.txt
imageio==2.24.0 # via -r requirements.txt, hyperspy, kikuchipy, nionswift, nionswift-io, nionui, scikit-image
imagesize==1.4.1 # via -r requirements.txt, sphinx
importlib-metadata==4.13.0 # via -r requirements.txt, flask, hyperspy, keyring, markdown, mkdocs, nomad-lab (pyproject.toml), sphinx, twine
......@@ -133,10 +133,10 @@ jupyter-telemetry==0.1.0 # via -r requirements.txt, jupyterhub
jupyterhub==1.4.2 # via -r requirements.txt, dockerspawner, nomad-lab (pyproject.toml), oauthenticator
jupyterlab-widgets==3.0.9 # via -r requirements.txt, ipywidgets
keyring==23.11.0 # via twine
kikuchipy==0.8.7 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
kikuchipy==0.8.7 # via -r requirements.txt
kiwisolver==1.4.4 # via -r requirements.txt, matplotlib
kombu==5.2.4 # via -r requirements.txt, celery
lark==1.1.5 # via -r requirements.txt, optimade, pynxtools (dependencies/parsers/nexus/pyproject.toml)
lark==1.1.5 # via -r requirements.txt, optimade
latexcodec==2.0.1 # via -r requirements.txt, pybtex
lazy-object-proxy==1.9.0 # via astroid
llvmlite==0.39.1 # via -r requirements.txt, numba
......@@ -171,16 +171,16 @@ mp-api==0.30.10 # via -r requirements.txt, pymatgen
mpmath==1.2.1 # via -r requirements.txt, sympy
mrcfile==1.4.3 # via -r requirements.txt, griddataformats
msgpack==1.0.4 # via -r requirements.txt, mmtf-python, mp-api, nomad-lab (pyproject.toml)
mypy==1.0.1 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
mypy==1.0.1 # via nomad-lab (pyproject.toml)
mypy-extensions==0.4.3 # via mypy
names==0.3.0 # via nomad-lab (pyproject.toml)
nanonispy @ git+https://github.com/ramav87/nanonispy.git@a0da87c58482d29624a2bf5deecb763dd1274212 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
nanonispy @ git+https://github.com/ramav87/nanonispy.git@a0da87c58482d29624a2bf5deecb763dd1274212 # via -r requirements.txt
natsort==8.2.0 # via -r requirements.txt, hyperspy
nest-asyncio==1.5.6 # via -r requirements.txt, ipykernel, jupyter-client
netcdf4==1.5.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
networkx==2.6.3 # via -r requirements.txt, matid (dependencies/matid/pyproject.toml), mdanalysis, pymatgen, radioactivedecay, scikit-image
networkx==2.6.3 # via -r requirements.txt, mdanalysis, nomad-lab (pyproject.toml), pymatgen, radioactivedecay, scikit-image
niondata==0.15.5 # via -r requirements.txt, nionswift, nionswift-io
nionswift==0.16.8 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
nionswift==0.16.8 # via -r requirements.txt
nionswift-io==0.15.1 # via -r requirements.txt, nionswift
nionui==0.6.11 # via -r requirements.txt, nionswift
nionutils==0.4.8 # via -r requirements.txt, niondata, nionswift, nionswift-io, nionui
......@@ -211,7 +211,7 @@ phonopy==2.11.0 # via -r requirements.txt, asr, nomad-lab (pyproject.t
pickleshare==0.7.5 # via -r requirements.txt, ipython
pillow==9.4.0 # via -r requirements.txt, imageio, matplotlib, nionswift, scikit-image
pint==0.17 # via -r requirements.txt, hyperspy, nomad-lab (pyproject.toml)
pip-tools==6.13.0 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
pip-tools==6.13.0 # via nomad-lab (pyproject.toml)
pkginfo==1.8.3 # via twine
platformdirs==3.1.1 # via -r requirements.txt, pooch, pylint, requests-cache
plotly==5.11.0 # via -r requirements.txt, asr, pymatgen
......@@ -227,13 +227,13 @@ pyasn1==0.4.8 # via -r requirements.txt, pyasn1-modules, python-jose
pyasn1-modules==0.2.8 # via -r requirements.txt, rfc3161ng
pybtex==0.24.0 # via -r requirements.txt, emmet-core, pymatgen
pycifrw==4.4.5 # via -r requirements.txt, diffpy-structure
pycodestyle==2.8.0 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
pycodestyle==2.8.0 # via nomad-lab (pyproject.toml)
pycparser==2.21 # via -r requirements.txt, cffi
pydantic==1.10.9 # via -r requirements.txt, emmet-core, fastapi, nomad-lab (pyproject.toml), optimade
pyfai==2023.9.0 # via -r requirements.txt, pyxem
pygments==2.14.0 # via -r requirements.txt, ipython, mkdocs-material, readme-renderer, sphinx
pyjwt[crypto]==2.6.0 # via -r requirements.txt, nomad-lab (pyproject.toml)
pylint==2.13.9 # via nomad-lab (pyproject.toml), pylint-mongoengine, pylint-plugin-utils, pynxtools (dependencies/parsers/nexus/pyproject.toml)
pylint==2.13.9 # via nomad-lab (pyproject.toml), pylint-mongoengine, pylint-plugin-utils
pylint-mongoengine==0.4.0 # via nomad-lab (pyproject.toml)
pylint-plugin-utils==0.7 # via nomad-lab (pyproject.toml), pylint-mongoengine
pymatgen==2023.2.28 # via -r requirements.txt, asr, emmet-core, mp-api, nomad-lab (pyproject.toml)
......@@ -242,10 +242,10 @@ pymongo==4.3.3 # via -r requirements.txt, mongoengine, nomad-lab (pyp
pyopenssl==23.0.0 # via -r requirements.txt, certipy
pyparsing==3.0.9 # via -r requirements.txt, matplotlib, mdtraj, rdflib
pyrsistent==0.19.3 # via -r requirements.txt, jsonschema
pytest==5.4.3 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml), pytest-cov, pytest-forked, pytest-timeout, pytest-xdist
pytest-cov==2.7.1 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
pytest==5.4.3 # via nomad-lab (pyproject.toml), pytest-cov, pytest-forked, pytest-timeout, pytest-xdist
pytest-cov==2.7.1 # via nomad-lab (pyproject.toml)
pytest-forked==1.6.0 # via pytest-xdist
pytest-timeout==1.4.2 # via nomad-lab (pyproject.toml), pynxtools (dependencies/parsers/nexus/pyproject.toml)
pytest-timeout==1.4.2 # via nomad-lab (pyproject.toml)
pytest-xdist==1.34.0 # via nomad-lab (pyproject.toml)
python-dateutil==2.8.2 # via -r requirements.txt, arrow, elasticsearch-dsl, ghp-import, hyperspy, ipyparallel, jupyter-client, jupyterhub, matplotlib, mkdocs-macros-plugin, pandas, rfc3161ng
python-dotenv==0.21.0 # via -r requirements.txt, uvicorn
......@@ -259,7 +259,7 @@ python-multipart==0.0.5 # via -r requirements.txt, nomad-lab (pyproject.toml)
pytz==2022.7.1 # via -r requirements.txt, babel, celery, nionswift, nomad-lab (pyproject.toml), pandas
pytz-deprecation-shim==0.1.0.post0 # via -r requirements.txt, tzlocal
pywavelets==1.3.0 # via -r requirements.txt, scikit-image
pyxem==0.15.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
pyxem==0.15.1 # via -r requirements.txt
pyyaml==6.0 # via -r requirements.txt, dask, hyperspy, kikuchipy, mkdocs, mkdocs-macros-plugin, nomad-lab (pyproject.toml), phonopy, pybtex, pyyaml-env-tag, uvicorn
pyyaml-env-tag==0.1 # via mkdocs
pyzeo==0.1.4 # via -r requirements.txt, nomad-lab (pyproject.toml)
......@@ -271,7 +271,7 @@ readme-renderer==37.3 # via twine
recommonmark==0.7.1 # via -r requirements.txt, nomad-lab (pyproject.toml)
redis==4.4.2 # via -r requirements.txt, celery
requests==2.28.2 # via -r requirements.txt, docker, hyperspy, jupyterhub, mp-api, nomad-lab (pyproject.toml), oauthenticator, optimade, pooch, pymatgen, python-gitlab, python-keycloak, requests-cache, requests-toolbelt, rfc3161ng, sphinx, twine
requests-cache==1.0.1 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
requests-cache==1.0.1 # via -r requirements.txt
requests-toolbelt==0.10.1 # via python-gitlab, twine
rfc3161ng==2.1.3 # via -r requirements.txt, nomad-lab (pyproject.toml)
rfc3339-validator==0.1.4 # via -r requirements.txt, jsonschema
......@@ -295,7 +295,7 @@ sniffio==1.3.0 # via -r requirements.txt, anyio, httpcore, httpx
snowballstemmer==2.2.0 # via -r requirements.txt, sphinx
soupsieve==2.3.2.post1 # via -r requirements.txt, beautifulsoup4
sparse==0.13.0 # via -r requirements.txt, hyperspy
spglib==2.0.2 # via -r requirements.txt, asr, emmet-core, matid (dependencies/matid/pyproject.toml), phonopy, pymatgen
spglib==2.0.2 # via -r requirements.txt, asr, emmet-core, phonopy, pymatgen
sphinx==5.3.0 # via -r requirements.txt, recommonmark
sphinxcontrib-applehelp==1.0.2 # via -r requirements.txt, sphinx
sphinxcontrib-devhelp==1.0.2 # via -r requirements.txt, sphinx
......@@ -322,14 +322,10 @@ traits==6.4.1 # via -r requirements.txt, hyperspy
transforms3d==0.4.1 # via -r requirements.txt, diffsims, pyxem
twine==3.4.2 # via nomad-lab (pyproject.toml)
typed-ast==1.4.2 # via nomad-lab (pyproject.toml)
types-pytz==2022.7.0.0 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-pyyaml==6.0.12.1 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-requests==2.28.11.16 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
types-urllib3==1.26.25.8 # via types-requests
typing-extensions==4.4.0 # via -r requirements.txt, astroid, emmet-core, gitpython, mp-api, mypy, numcodecs, pydantic, pylint, starlette
typish==1.9.3 # via -r requirements.txt, nptyping
tzdata==2023.3 # via -r requirements.txt, pytz-deprecation-shim
tzlocal==4.3 # via -r requirements.txt, nionswift, pynxtools (dependencies/parsers/nexus/pyproject.toml)
tzlocal==4.3 # via -r requirements.txt, nionswift
uncertainties==3.1.7 # via -r requirements.txt, lmfit, pymatgen
unidecode==1.3.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
uri-template==1.2.0 # via -r requirements.txt, jsonschema
......@@ -352,7 +348,7 @@ widgetsnbextension==4.0.9 # via -r requirements.txt, ipywidgets
wrapt==1.12.1 # via -r requirements.txt, astroid, nomad-lab (pyproject.toml)
xarray==0.20.2 # via -r requirements.txt, nomad-lab (pyproject.toml)
zarr==2.12.0 # via -r requirements.txt, hyperspy
zipfile37==0.1.3 # via -r requirements.txt, pynxtools (dependencies/parsers/nexus/pyproject.toml)
zipfile37==0.1.3 # via -r requirements.txt
zipp==3.11.0 # via -r requirements.txt, importlib-metadata
zipstream-new==1.1.5 # via -r requirements.txt, nomad-lab (pyproject.toml)
......
requirements.txt
+ 1
− 1
View file @ b3a6d40f
......@@ -147,7 +147,7 @@ nanonispy @ git+https://github.com/ramav87/nanonispy.git@a0da87c58482d29624a2bf5
natsort==8.2.0 # via hyperspy
nest-asyncio==1.5.6 # via ipykernel, jupyter-client
netcdf4==1.5.4 # via electronicparsers (dependencies/parsers/electronic/pyproject.toml), nomad-lab (pyproject.toml)
networkx==2.6.3 # via matid (dependencies/matid/pyproject.toml), mdanalysis, pymatgen, radioactivedecay, scikit-image
networkx==2.6.3 # via matid (dependencies/matid/pyproject.toml), mdanalysis, nomad-lab (pyproject.toml), pymatgen, radioactivedecay, scikit-image
niondata==0.15.5 # via nionswift, nionswift-io
nionswift==0.16.8 # via pynxtools (dependencies/parsers/nexus/pyproject.toml)
nionswift-io==0.15.1 # via nionswift
......
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