Fixed issue #484

elastic @ 6c8d32cd

-Subproject commit 0b328877ed067154661276da6251a501aaca8d57
+Subproject commit 6c8d32cd0107b0cfda9890c82240d5309c568e1f

exciting @ 7160799b

-Subproject commit 7ad1a65e1ccd0f413f6b822ffd263854272db7e5
+Subproject commit 7160799b23d96a7557584f319822227548d4dd1d

fhi-aims @ 076cff5b

-Subproject commit 2247da576335a97e776ae58091d82774f5122525
+Subproject commit 076cff5b53332309fbd35a5febf2c748cf611519

phonopy @ edec79da

-Subproject commit c09f64143b6df098bd06882465fb9e4d29c44578
+Subproject commit edec79dae93b1730d77205168c02aaaa5683ea13

nomad/parsing/file_parser/file_parser.py

@@ -73,6 +73,9 @@ class FileParser:
         results default will be returned. A pint unit can be provided which is attached
         to the returned value.
         '''
+        if self.mainfile is None:
+            return default
+
         self._key = key
         self._kwargs = kwargs
         val = self.results.get(key, None)

nomad/parsing/file_parser/text_parser.py

@@ -103,7 +103,7 @@ class Quantity:
             self.shape = None
         elif isinstance(quantity, mQuantity):
             self.name = quantity.name
-            self.dtype = quantity.type
+            self.dtype = quantity.type.type if isinstance(quantity.type, np.dtype) else quantity.type
             self.unit = quantity.unit
             # check if metainfo shape has dependencies
             self.shape = quantity.shape
@@ -425,6 +425,7 @@ class TextParser(FileParser):
                     span = np.array(res.span()) + self.file_offset
                     sub_parser = quantity._sub_parser.copy()
                     sub_parser.mainfile = self.mainfile
+                    sub_parser.logger = self.logger
                     if (span[1] - span[0]) < mmap.PAGESIZE or True:
                         # self.logger.warn(
                         #     'Cannot use sub parser on quantity %s with blocks with size <'
@@ -447,6 +448,7 @@ class TextParser(FileParser):
                     span = np.array(res.span()) + self.file_offset
                     sub_parser = quantity._sub_parser.copy()
                     sub_parser.mainfile = self.mainfile
+                    sub_parser.logger = self.logger
                     if (span[1] - span[0]) < mmap.PAGESIZE or True:
                         # self.logger.warn(
                         #     'Cannot use sub parser on quantity %s with blocks with size <'