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Commit 31d96fb4 authored by Klaus Reuter's avatar Klaus Reuter
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add remark about source activate and shells

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README.md
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# Condainer - Compressed Conda environments for HPC systems # Condainer - Compressed Conda environments for HPC systems
![avatar](./fig/condainer_small.jpg)
## TL;DR - Quick start guide ## TL;DR - Quick start guide
Condainer puts Conda environments into compressed (squashfs) images which makes Condainer puts Conda environments into compressed (squashfs) images which makes
...@@ -33,6 +31,9 @@ shell session, sililar to plain Conda or to a Python virtual environment: ...@@ -33,6 +31,9 @@ shell session, sililar to plain Conda or to a Python virtual environment:
source activate source activate
``` ```
Please note that `source activate` will only work with bourne shells (e.g.
`bash` or `zsh`), not with the older C shells and korn shells.
### Alternatively, run an executable from a compressed environment directly ### Alternatively, run an executable from a compressed environment directly
In case you do not want to activate the environment, you can run individual executables from the environment transparently, e.g. In case you do not want to activate the environment, you can run individual executables from the environment transparently, e.g.
...@@ -202,4 +203,4 @@ No installer is downloaded in case that variable is defined. ...@@ -202,4 +203,4 @@ No installer is downloaded in case that variable is defined.
Condainer is available under the MIT license at <https://gitlab.mpcdf.mpg.de/mpcdf/condainer> or <https://github.com/reuterk/condainer>. Condainer is available under the MIT license at <https://gitlab.mpcdf.mpg.de/mpcdf/condainer> or <https://github.com/reuterk/condainer>.
Copyright © 2023- Klaus Reuter <klaus.reuter@mpcdf.mpg.de>, Max Planck Computing and Data Facility Copyright © 2023- Klaus Reuter <klaus.reuter@mpcdf.mpg.de>, Max Planck Computing and Data Facility
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