Commits · c6e7e7a1f15f21ecd7ff0a6da0848f9430865703 · Lucas Miranda / deepOF

Mar 16, 2021
- Updated notebook with empirically derived radius for latent neighborhood · c6e7e7a1
  Lucas Miranda authored 4 years ago
  
  c6e7e7a1
Mar 15, 2021
- Set default radius for latent entropy computation using an empirically derived linear equation · e863c9bb
  Lucas Miranda authored 4 years ago
  
  e863c9bb
- Modified cluster purity computation. Instead of KNN, we now look at... · a72a7a81
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  a72a7a81
Mar 14, 2021
- Modified cluster purity computation. Instead of KNN, we now look at... · 3bd7d6ba
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  3bd7d6ba
- Modified cluster purity computation. Instead of KNN, we now look at... · ba61a305
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  ba61a305
Mar 13, 2021
- Modified cluster purity computation. Instead of KNN, we now look at... · 040daada
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  040daada
- Modified cluster purity computation. Instead of KNN, we now look at... · 198dc472
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  198dc472
- Modified cluster purity computation. Instead of KNN, we now look at... · 89930d71
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  89930d71
Mar 12, 2021
- Modified cluster purity computation. Instead of KNN, we now look at... · 1127311d
  Lucas Miranda authored 4 years ago
  
  Modified cluster purity computation. Instead of KNN, we now look at neighborhoods of a predefined radius
  1127311d
- Implemented KNN_purity callback · a07edada
  Lucas Miranda authored 4 years ago
  
  a07edada
- Implemented KNN_purity callback · dd62bd2e
  Lucas Miranda authored 4 years ago
  
  dd62bd2e
- Implemented KNN_purity callback · 330bbd80
  Lucas Miranda authored 4 years ago
  
  330bbd80
- Prototyped KNN_purity callback · 3c773f9f
  Lucas Miranda authored 4 years ago
  
  3c773f9f
- Prototyped KNN_purity callback · 9f0a9f31
  Lucas Miranda authored 4 years ago
  
  9f0a9f31
- Prototyped KNN_purity callback · 31a78518
  Lucas Miranda authored 4 years ago
  
  31a78518
- Prototyped KNN_purity callback · 78d8baef
  Lucas Miranda authored 4 years ago
  
  78d8baef
Mar 11, 2021
- Prototyped KNN_purity callback · a13aac38
  Lucas Miranda authored 4 years ago
  
  a13aac38
- Prototyped KNN_purity callback · 9219111b
  Lucas Miranda authored 4 years ago
  
  9219111b
- Prototyped KNN_purity callback · 56de58c2
  Lucas Miranda authored 4 years ago
  
  56de58c2
- Prototyped KNN_purity callback · 77d77a1d
  Lucas Miranda authored 4 years ago
  
  77d77a1d
- Added nose2body to rule_based_annotation() · 8ddff252
  Lucas Miranda authored 4 years ago
  
  8ddff252
- Added nose2body to rule_based_annotation() · 480837ea
  Lucas Miranda authored 4 years ago
  
  480837ea
- Added nose2body to rule_based_annotation() · 358b099b
  Lucas Miranda authored 4 years ago
  
  358b099b
Mar 10, 2021
- Added nose2body to rule_based_annotation() · b0cb5c69
  Lucas Miranda authored 4 years ago
  
  b0cb5c69
Dec 06, 2020
- Added negative log likelihood of a Bernoulli distribution as reconstruction loss · 7d89b57d
  Lucas Miranda authored 4 years ago
  
  7d89b57d
- Added more thorough testing of KLDivergence loss · b8d3c926
  Lucas Miranda authored 4 years ago
  
  b8d3c926
Nov 30, 2020
- Reformatted files using last version of Black; fixed seaborn update issues · 3234508f
  Lucas Miranda authored 4 years ago
  
  3234508f
Nov 25, 2020
- Updated default GMVAE models · 3243a42f
  Lucas Miranda authored 4 years ago
  
  3243a42f
Nov 22, 2020
- updated dependencies · 502f5bcb
  Lucas Miranda authored 4 years ago
  
  502f5bcb
- updated dependencies · f00205fc
  Lucas Miranda authored 4 years ago
  
  f00205fc
Nov 12, 2020
- Added experimental phenotype classification branch to GMVAEP · dd890b89
  Lucas Miranda authored 4 years ago
  
  dd890b89
Oct 03, 2020
- added inplace alignment on deepof.data.coordinates.get_coords() on data.py · 7b8696ea
  Lucas Miranda authored 4 years ago
  
  7b8696ea
Sep 19, 2020
- Excluded debug regions from coverage report - added code climate template to .gitlab-ci.yml · 3379ec5e
  Lucas Miranda authored 4 years ago
  
  3379ec5e
Sep 18, 2020
- Added tests for model_utils.py and models.py · c2e74b1a
  Lucas Miranda authored 4 years ago
  
  c2e74b1a
- Added tests for model_utils.py · cae7ee68
  Lucas Miranda authored 4 years ago
  
  cae7ee68
- Added tests for KLDivergence and MMDiscrepancy layers · 27b68380
  Lucas Miranda authored 4 years ago
  
  27b68380
- Added tests for model_utils.py functions · e40304a1
  Lucas Miranda authored 4 years ago
  
  e40304a1
- Added tests for 1_cycle_scheduler in model_utils.py · d3e11a9a
  Lucas Miranda authored 4 years ago
  
  d3e11a9a
Sep 17, 2020
- Reformatted files · 04541053
  Lucas Miranda authored 4 years ago
  
  04541053
- Added tests for model_utils.py · ca53fa78
  Lucas Miranda authored 4 years ago
  
  ca53fa78

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