output directory is always were the config file is located

cfg/cygnusa.cfg

cfg/cygnusa_mf.cfg

cfg/cygnusa_mf_cfm.cfg

cfg/cygnusa_polarization.cfg

cfg/gauss_001almacycle53noisy.cfg

cfg/mf.cfg

misc/mpa_cluster/sample_reconstruction/cfg.txt

misc/mpa_cluster/total_script.sh

resolve/command_line/resolve.py

resolve/config_utils.py