Commit 6203d28e authored by Martin Reinecke's avatar Martin Reinecke
Browse files

intriduce flags

parent 99be1cb6
......@@ -394,19 +394,22 @@ template<typename T> class Baselines
vector<UVW<T>> coord;
vector<T> scaling;
vector<bool> flags;
size_t nrows, nchan;
size_t channelbits, channelmask;
Baselines(const pyarr_c<T> &coord_, const pyarr_c<T> &scaling_)
Baselines(const pyarr_c<T> &coord_, const pyarr_c<T> &scaling_,
const pyarr_c<bool> &flags_)
myassert(coord_.ndim()==2, "coord array must be 2D");
myassert(coord_.shape(1)==3, "coord.shape[1] must be 3");
myassert(scaling_.ndim()==1, "scaling array must be 1D");
nrows = coord_.shape(0)/scaling_.shape(0);
"bad array dimensions");
nrows = coord_.shape(0);
nchan = scaling_.shape(0);
myassert(flags_.ndim()==2, "flags array must be 2D");
myassert(size_t(flags_.shape(0))==nrows, "flags.shape[0] must be nrows");
myassert(size_t(flags_.shape(1))==nchan, "flags.shape[1] must be chan");
for (size_t i=0; i<nchan; ++i)
scaling[i] =[i];
......@@ -414,6 +417,10 @@ template<typename T> class Baselines
auto cood =;
for (size_t i=0; i<coord.size(); ++i)
coord[i] = UVW<T>(cood[3*i], cood[3*i+1], cood[3*i+2]);
for (size_t i=0; i<nrows*nchan; ++i)
flags[i] = (pflags[i]!=0);
channelbits = bits_needed(nchan);
channelmask = (size_t(1)<<channelbits)-1;
auto rowbits = bits_needed(nrows);
......@@ -427,11 +434,12 @@ template<typename T> class Baselines
vector<uint32_t> odata;
for (size_t i=0; i<nrows; ++i)
for (int j=chbegin; j<chend; ++j)
auto w = coord[i].w*scaling[j];
if ((w>=wmin) && (w<wmax))
if (!flags[i*nchan + j])
auto w = coord[i].w*scaling[j];
if ((w>=wmin) && (w<wmax))
return odata;
......@@ -915,6 +923,8 @@ coord: np.array((nrows, 3), dtype=np.float)
u, v and w coordinates for each row
scaling: np.array((nchannels,), dtype=np.float)
scaling factor for u, v, w for each individual channel
flags: np.array((nrows, nchannels), dtype=np.bool)
"True" indicates that the value should not be used
const char *BL_ms2vis_DS = R"""(
......@@ -974,7 +984,8 @@ PYBIND11_MODULE(nifty_gridder, m)
using namespace pybind11::literals;
py::class_<Baselines<double>> (m, "Baselines", Baselines_DS)
.def(py::init<pyarr_c<double>, pyarr_c<double>>(), "coord"_a, "scaling"_a)
.def(py::init<const pyarr_c<double> &, const pyarr_c<double> &,
const pyarr_c<bool> &>(), "coord"_a, "scaling"_a, "flags"_a)
.def ("ms2vis",&Baselines<double>::ms2vis, BL_ms2vis_DS, "ms"_a, "idx"_a)
.def ("vis2ms",&Baselines<double>::vis2ms, BL_vis2ms_DS, "vis"_a, "idx"_a)
.def ("add_vis_to_ms",&Baselines<double>::add_vis_to_ms, BL_add_vis_to_ms_DS,
......@@ -992,7 +1003,8 @@ PYBIND11_MODULE(nifty_gridder, m)
m.def("grid2vis",&grid2vis<double>, "baselines"_a, "gconf"_a, "idx"_a, "grid"_a);
py::class_<Baselines<float>> (m, "Baselines_f", Baselines_DS)
.def(py::init<pyarr_c<float>, pyarr_c<float>>(), "coord"_a, "scaling"_a)
.def(py::init<const pyarr_c<float> &, const pyarr_c<float> &,
const pyarr_c<bool> &>(), "coord"_a, "scaling"_a, "flags"_a)
.def ("ms2vis",&Baselines<float>::ms2vis, BL_ms2vis_DS, "ms"_a, "idx"_a)
.def ("vis2ms",&Baselines<float>::vis2ms, BL_vis2ms_DS, "vis"_a, "idx"_a)
.def ("add_vis_to_ms",&Baselines<float>::add_vis_to_ms, BL_add_vis_to_ms_DS,
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