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Commit a2d053e0 authored by Gordian Edenhofer's avatar Gordian Edenhofer
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Revert "Add instructions on citing NIFTy" 

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README.md
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......@@ -46,7 +46,7 @@ Installation
Detailed installation instructions can be found in the NIFTy Documentation for:
- [users](http://ift.pages.mpcdf.de/nifty/user/installation.html)
- [developers](http://ift.pages.mpcdf.de/nifty/dev/index.html)
- [developers](http://ift.pages.mpcdf.de/nifty/dev/index.html)
### Run the tests
......@@ -84,9 +84,6 @@ The NIFTy package is licensed under the terms of the
[GPLv3](https://www.gnu.org/licenses/gpl.html) and is distributed
*without any warranty*.
### Citing NIFTy
Please refer to [the corresponding entry on citing NIFTy in the documentation](https://ift.pages.mpcdf.de/nifty/user/citations.html).
Contributors
------------
......
docs/source/user/citations.rst
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Citing NIFTy and the Magic Inside
=================================
NIFTy-related publications
==========================
To cite the software library NIFTy, please use the following references:
.. parsed-literal::
@article{asclnifty5,
title={NIFTy5: Numerical Information Field Theory v5},
author={Arras, Philipp and Baltac, Mihai and Ensslin, Torsten A and Frank, Philipp and Hutschenreuter, Sebastian and Knollmueller, Jakob and Leike, Reimar and Newrzella, Max-Niklas and Platz, Lukas and Reinecke, Martin and others},
journal={Astrophysics Source Code Library},
year={2019}
}
.. parsed-literal::
@software{nifty,
author = {{Martin Reinecke, Theo Steininger, Marco Selig}},
title = {NIFTy -- Numerical Information Field TheorY},
url = {https://gitlab.mpcdf.mpg.de/ift/NIFTy},
version = {nifty8},
date = {2018-04-05},
}
.. parsed-literal::
@misc{niftyre,
author = {{Edenhofer}, Gordian and {Frank}, Philipp and {Leike}, Reimar H. and {Roth}, Jakob and {Guerdi}, Massin and {Enßlin}, Torsten A.},
title = {{Re-Envisioning Numerical Information Field Theory (NIFTy): A Library for Gaussian Processes and Variational Inference}},
keywords = {Software},
year = 2023,
howpublished = {in preparation}
}
@article{nifty5,
author = {{Arras}, Philipp and {Baltac}, Mihai and {Ensslin}, Torsten A. and {Frank}, Philipp and {Hutschenreuter}, Sebastian and {Knollmueller}, Jakob and {Leike}, Reimar and {Newrzella}, Max-Niklas and {Platz}, Lukas and {Reinecke}, Martin and {Stadler}, Julia},
title = {{NIFTy5: Numerical Information Field Theory v5}},
keywords = {Software},
howpublished = {Astrophysics Source Code Library, record ascl:1903.008},
year = 2019,
month = 03,
eid = {ascl:1903.008},
pages = {ascl:1903.008},
archiveprefix = {ascl},
eprint = {1903.008}
}
@article{nifty3,
author = {{Steininger}, Theo and {Dixit}, Jait and {Frank}, Philipp and {Greiner}, Maksim and {Hutschenreuter}, Sebastian and {Knollm{\"u}ller}, Jakob and {Leike}, Reimar and {Porqueres}, Natalia and {Pumpe}, Daniel and {Reinecke}, Martin and {{\v{S}}raml}, Matev{\v{z}} and {Varady}, Csongor and {En{\ss}lin}, Torsten},
title = "{NIFTy 3 - Numerical Information Field Theory: A Python Framework for Multicomponent Signal Inference on HPC Clusters}",
journal = {{Annalen der Physik}},
year = 2019,
month = {03},
volume = {531},
number = {3},
pages = {1800290},
doi = {10.1002/andp.201800290},
}
@article{nifty1,
author = {{Selig}, M. and {Bell}, M.~R. and {Junklewitz}, H. and {Oppermann}, N. and {Reinecke}, M. and {Greiner}, M. and {Pachajoa}, C. and {En{\ss}lin}, T.~A.},
title = "{NIFTY - Numerical Information Field Theory. A versatile PYTHON library for signal inference}",
journal = {Astronomy \& Astrophysics},
author = {{Selig}, M. and {Bell}, M.~R. and {Junklewitz}, H. and {Oppermann}, N. and {Reinecke}, M. and {Greiner}, M. and {Pachajoa}, C. and {En{\ss}lin}, T.~A.},
title = "{NIFTY - Numerical Information Field Theory. A versatile PYTHON library for signal inference}",
journal = {\aap},
archivePrefix = "arXiv",
eprint = {1301.4499},
primaryClass = "astro-ph.IM",
keywords = {methods: data analysis, methods: numerical, methods: statistical, techniques: image processing},
year = 2013,
month = {06},
volume = 554,
eid = {A26},
pages = {A26},
doi = {10.1051/0004-6361/201321236},
}
eprint = {1301.4499},
primaryClass = "astro-ph.IM",
keywords = {methods: data analysis, methods: numerical, methods: statistical, techniques: image processing},
year = 2013,
month = jun,
volume = 554,
eid = {A26},
pages = {A26},
doi = {10.1051/0004-6361/201321236},
adsurl = {http://cdsads.u-strasbg.fr/abs/2013A%26A...554A..26S},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
For the inference machinery, please cite:
.. parsed-literal::
@article{nifty3,
author = {{Steininger}, T. and {Dixit}, J. and {Frank}, P. and {Greiner}, M. and {Hutschenreuter}, S. and {Knollm{\"u}ller}, J. and {Leike}, R. and {Porqueres}, N. and {Pumpe}, D. and {Reinecke}, M. and {{\v S}raml}, M. and {Varady}, C. and {En{\ss}lin}, T.},
title = "{NIFTy 3 - Numerical Information Field Theory - A Python framework for multicomponent signal inference on HPC clusters}",
journal = {ArXiv e-prints},
archivePrefix = "arXiv",
eprint = {1708.01073},
primaryClass = "astro-ph.IM",
keywords = {Astrophysics - Instrumentation and Methods for Astrophysics},
year = 2017,
month = aug,
adsurl = {http://cdsads.u-strasbg.fr/abs/2017arXiv170801073S},
adsnote = {Provided by the SAO/NASA Astrophysics Data System}
}
.. parsed-literal::
@article{Frank2021,
author = {Frank, Philipp and Leike, Reimar and Enßlin, Torsten A.},
title = {Geometric Variational Inference},
journal = {Entropy},
volume = {23},
year = {2021},
number = {7},
@article{geovi,
author = {Frank, Philipp and Leike, Reimar and Enßlin, Torsten A.},
title = {Geometric Variational Inference},
journal = {Entropy},
volume = {23},
year = {2021},
number = {7},
article-number = {853},
url = {https://www.mdpi.com/1099-4300/23/7/853},
issn = {1099-4300},
doi = {10.3390/e23070853}
}
@misc{knollmüller2020metric,
title = {Metric Gaussian Variational Inference},
author = {Jakob Knollmüller and Torsten A. Enßlin},
year = {2020},
eprint = {1901.11033},
archivePrefix = {arXiv},
primaryClass = {stat.ML}
}
If you use the correlated field model from NIFTy, please additionally cite:
url = {https://www.mdpi.com/1099-4300/23/7/853},
issn = {1099-4300},
doi = {10.3390/e23070853}
}
.. parsed-literal::
@article{Arras2022,
author = {{Arras}, Philipp and {Frank}, Philipp and {Haim}, Philipp and {Knollm{\"u}ller}, Jakob and {Leike}, Reimar and {Reinecke}, Martin and {En{\ss}lin}, Torsten},
title = "{Variable structures in M87* from space, time and frequency resolved interferometry}",
journal = {Nature Astronomy},
year = 2022,
month = jan,
volume = {6},
pages = {259-269},
doi = {10.1038/s41550-021-01548-0},
}
@article{Arras2021,
author = {{Arras}, Philipp and {Bester}, Hertzog L. and {Perley}, Richard A. and {Leike}, Reimar and {Smirnov}, Oleg and {Westermann}, R{\"u}diger and {En{\ss}lin}, Torsten A.},
title = "{Comparison of classical and Bayesian imaging in radio interferometry. Cygnus A with CLEAN and resolve}",
journal = {Astronomy and Astrophysics},
year = 2021,
month = feb,
volume = {646},
eid = {A84},
pages = {A84},
doi = {10.1051/0004-6361/202039258},
}
For the charted refinement model, please cite:
@article{correlated_field_model_one_spectrum,
author = {{Arras}, Philipp and {Bester}, Hertzog L. and {Perley}, Richard A. and {Leike}, Reimar and {Smirnov}, Oleg and {Westermann}, R{\"u}diger and {En{\ss}lin}, Torsten A.},
title = "{Comparison of classical and Bayesian imaging in radio interferometry. Cygnus A with CLEAN and resolve}",
journal = {Astronomy and Astrophysics},
year = 2021,
month = feb,
volume = {646},
eid = {A84},
pages = {A84},
doi = {10.1051/0004-6361/202039258},
}
.. parsed-literal::
@misc{Edenhofer2022,
doi = {10.48550/ARXIV.2206.10634},
url = {https://arxiv.org/abs/2206.10634},
author = {Edenhofer, Gordian and Leike, Reimar H. and Frank, Philipp and Enßlin, Torsten A.},
keywords = {Machine Learning (cs.LG), Machine Learning (stat.ML), FOS: Computer and information sciences, FOS: Computer and information sciences},
title = {Sparse Kernel Gaussian Processes through Iterative Charted Refinement (ICR)},
publisher = {arXiv},
year = {2022},
}
@article{correlated_field_model_multiple_spectra,
author = {{Arras}, Philipp and {Frank}, Philipp and {Haim}, Philipp and {Knollm{\"u}ller}, Jakob and {Leike}, Reimar and {Reinecke}, Martin and {En{\ss}lin}, Torsten},
title = "{Variable structures in M87* from space, time and frequency resolved interferometry}",
journal = {Nature Astronomy},
year = 2022,
month = jan,
volume = {6},
pages = {259-269},
doi = {10.1038/s41550-021-01548-0},
}
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