Skip to content
GitLab
Projects
Groups
Snippets
/
Help
Help
Support
Community forum
Keyboard shortcuts
?
Submit feedback
Contribute to GitLab
Sign in
Toggle navigation
Menu
Open sidebar
ift
IMAGINE
Commits
2e6c5343
Commit
2e6c5343
authored
Mar 07, 2017
by
Theo Steininger
Browse files
Added likelihood to Sample class.
parent
ef11cbe0
Changes
1
Hide whitespace changes
Inline
Side-by-side
imagine/sample.py
View file @
2e6c5343
...
...
@@ -2,6 +2,8 @@
import
simplejson
as
json
import
numpy
as
np
from
keepers
import
Loggable
,
\
Versionable
...
...
@@ -10,10 +12,13 @@ from imagine.magnetic_fields import MagneticField
class
Sample
(
Loggable
,
Versionable
,
object
):
def
__init__
(
self
):
self
.
_variables
=
None
self
.
_magnetic_field
=
None
self
.
_observables
=
None
def
__init__
(
self
,
variables
=
None
,
magnetic_field
=
None
,
observables
=
None
,
likelihood
=
None
,
total_likelihood
=
None
):
self
.
variables
=
variables
self
.
magnetic_field
=
magnetic_field
self
.
observables
=
observables
self
.
likelihood
=
likelihood
self
.
total_likelihood
=
total_likelihood
@
property
def
variables
(
self
):
...
...
@@ -50,10 +55,36 @@ class Sample(Loggable, Versionable, object):
parsed_observables
[
key
]
=
value
self
.
_observables
=
parsed_observables
@
property
def
likelihood
(
self
):
return
self
.
_likelihood
@
likelihood
.
setter
def
likelihood
(
self
,
likelihood
):
if
np
.
isscalar
(
likelihood
):
likelihood
=
(
likelihood
,
)
else
:
likelihood
=
tuple
(
likelihood
)
self
.
_likelihood
=
likelihood
@
property
def
total_likelihood
(
self
):
return
self
.
_total_likelihood
@
total_likelihood
.
setter
def
total_likelihood
(
self
,
total_likelihood
):
self
.
_total_likelihood
=
np
.
float
(
total_likelihood
)
def
_to_hdf5
(
self
,
hdf5_group
):
if
self
.
_variables
is
not
None
:
hdf5_group
.
attrs
[
'variables'
]
=
json
.
dumps
(
self
.
_variables
)
if
self
.
_likelihood
is
not
None
:
hdf5_group
[
'likelihood'
]
=
self
.
_likelihood
if
self
.
_total_likelihood
is
not
None
:
hdf5_group
.
attrs
[
'total_likelihood'
]
=
self
.
_total_likelihood
return_dict
=
{}
if
self
.
_magnetic_field
is
not
None
:
return_dict
[
'magnetic_field'
]
=
self
.
_magnetic_field
...
...
@@ -74,6 +105,16 @@ class Sample(Loggable, Versionable, object):
except
(
KeyError
):
pass
try
:
new_sample
.
_likelihood
=
tuple
(
hdf5_group
[
'likelihood'
])
except
(
KeyError
):
pass
try
:
new_sample
.
_total_likelihood
=
hdf5_group
.
attrs
[
'total_likelihood'
]
except
(
KeyError
):
pass
try
:
magnetic_field
=
repository
.
get
(
'magnetic_field'
,
hdf5_group
)
new_sample
.
_magnetic_field
=
magnetic_field
...
...
Write
Preview
Supports
Markdown
0%
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment