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Beata Turonova / GAPSTOP_TM
GNU General Public License v3.0 or laterGPU-Accelerated Python STOPgap for Template Matching is an open-source SW for fast template matching (TM) in cryo electron tomograms that is based on TM routines from STOPGAP.
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An implementation of the presented framework in an article in J. Chem. Phys. 2023 (accepted DOI: 10.1063/5.0160369), Manuscript title: A Fuzzy Classification Framework to Identify Equivalent Atoms in Complex Materials and Molecules.
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A repository for AI containers for the MPCDF HPC systems: recipes and how to's
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The aim is to update the existing Coast Guard data reduction pipeline. It will be migrated to python3 and extended to support parallel processing. The new pipeline is intended to run on the Effelsberg cluster.
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mpcdf / Condainer
MIT LicenseBuild and manage conda environments in compressed image files for efficiency, portability, and reproducibility. Useful on the large parallel filesystems of HPC clusters and supercomputers to avoid e.g. performance and inode issues.
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David Carreto Fidalgo / slurm_sweeps
MIT LicenseA simple tool to perform parameter sweeps on SLURM clusters.
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mpcdf / pocli
MIT LicenseA simple lightweight command line client for ownCloud supporting basic file operations.
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Daniel Boeckenhoff / w7x
MIT LicenseThe w7x package is a simulation framework that defines interfaces for simulation codes with interchangeable backends, computation pipelines in a directed acyclic graph that communicate via a central state.
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ift / public / HCBI
GNU General Public License v3.0 onlyInformation Field Theory for High Contrast Imaging
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