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elpa
elpa
Commits
a368d0a2
Commit
a368d0a2
authored
Dec 23, 2015
by
Andreas Marek
Browse files
Merge branch 'master' into ELPA_GPU
parents
827974ce
2954dc5f
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a368d0a2
jobs
:
script
:
./autogen.sh && ./configure && make && make check TEST_FLAGS='1500 50 16'
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0 → 100644
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INSTALL
View file @
a368d0a2
...
...
@@ -9,7 +9,7 @@ Debian, and OpenSuse. More, will hopefully follow in the future.
If you want to build (or have to since no packages are available) ELPA yourself,
please note that ELPA is shipped with a typical "configure" and "make"
procedure. This is the only supported way how to build and install ELPA.
autotools
procedure. This is the only supported way how to build and install ELPA.
If you obtained ELPA from the official git repository, you will not find
the needed configure script! Please look at the "INSTALL_FROM_GIT_VERSION" file
...
...
@@ -17,9 +17,16 @@ for the documentation how to proceed.
If --- against our recommendations --- you do not want to install ELPA as
library, but to include it in your source code you will have to find a solution
by yourself. If you do this anyway, please distribute then all files of ELPA
with your code.
library, or you do not want to use the autotools you will have to find a solution
by yourself. This approach is NOT supported by us in any way and we strongly discourage
this approach.
If you do this, because you want to include ELPA within your code project (i.e. use
ELPA not as an external library but "assimilate" it in your projects ),
please distribute then _ALL_ files (as obtained from an official release tar-ball)
of ELPA with your code. Note, however, that including the ELPA source files in your
code projects (and not using ELPA as external library) is only allowed under the terms of
the LGPL license if your code is ALSO under LGPL.
(A): Installing ELPA as library with configure
...
...
@@ -34,7 +41,31 @@ The configure installation is best done in four steps
elpa2-kernel, each is optimized and tuned for a different
architecture.
1.1) Choice of ELPA2 kernels
1.1) Choice of MPI compiler (wrappers)
It is mandatory that the C and C++ parts are compiled with the
GNU C, C++ compilers. Thus, all ELPA test programs which are written
in C must be compiled and linked with the MPI compiler (wrapper) which uses
the GNU C compilers.
The Fortran parts of ELPA can be compiled with any Fortran compiler of
your choice. It is for example quite common to compile the Fortran part
with the Intel Fortran compiler but the C,C++ parts must be compiled with
the GNU compilers.
Thus special care has to be taken that the correct MPI compiler (wrappers)
are found by the autotools! The configure script tries to find the correct
wrappers automatically, but sometimes it will fail.
In these cases it is necessary to set these compilers by hand:
../configure FC=fortran_compiler_wrapper_of_your_choice CC=gnu_compiler_wrapper
will tell autotools which wrappers to take.
1.2) Choice of ELPA2 kernels
With the release of ELPA (2014.06 or newer) it is _not_
mandatory any more to define the (real and complex) kernels
...
...
@@ -52,7 +83,7 @@ The configure installation is best done in four steps
file "./src/elpa2_kernels/README_elpa2_kernels.txt".
1.
2
Setting up Blacs/Scalapack
1.
3)
Setting up Blacs/Scalapack
The configure script tries to auto-detect an installed Blacs/Scalapack
library. If this is successful, you do not have to specify anything
...
...
@@ -86,7 +117,7 @@ The configure installation is best done in four steps
the configure procedure will check whether Blacs/Scalapack is available
at build-time and try to link with it.
1.
3
Setting optimizations
1.
4)
Setting optimizations
Please set the optimisation that you prefer with the
...
...
@@ -108,6 +139,9 @@ The configure installation is best done in four steps
if the hardware does. If you already included "-mAVX" in the
flags, you can skip "-march=native".
If you want to use the newer AVX2 instructions, assuming they are supported on
your hardware, please set CFLAGS="-march=avx2 -mfma" and CXXFLAGS="-march=avx2 -mfma".
Setting the optimization flags for the AVX kernels can be a hassle. If AVX
kernels are build for your system, you can set the configure option
...
...
@@ -119,19 +153,22 @@ The configure installation is best done in four steps
./configure CFLAGS="-O2" CXXFLAGS="-O2" FCFLAGS="-O2"
An istallation with AVX2 and best-optimizations could thus look like this:
./configure CFLAGS="-O2 -mavx2 -mfma" CXXFLAGS="-O2 -mavx2 -mfma" FCFLAGS="-O2" --with-avx-optimization
1.
4
Installation location
1.
5)
Installation location
Set the "--prefix" flag if you wish another installation location than
the default "/usr/local/".
1.
5
Hybrid OpenMP support
1.
6)
Hybrid OpenMP support
If you want to use the hybrid MPI/OpenMP version of ELPA please specify
"--enable-openmp". Note that the ELPA library will then contain a "_mt" in
it's name to indicate multi threading support.
1.
6
Other
1.
7)
Other
Note, that at the moment we do not officially support "cross compilation"
although it should work.
...
...
@@ -161,6 +198,10 @@ The configure installation is best done in four steps
new feature. With the same thought in mind, a binary "elpa2_print_kernels"
is provided, which is rather self-explanatory.
Also some of the above mentioned tests are provided as C source files.
These should demonstrate, how to call ELPA from a C program (i.e. which headers to include
and call the ELPA functions). They are NOT intended as a copy and paste solution!
4) run "make install"
...
...
LIBRARY_INTERFACE
View file @
a368d0a2
...
...
@@ -24,3 +24,11 @@ https://www.gnu.org/software/libtool/manual/html_node/Updating-version-info.html
The state of release 2015.02.002 defines this interface
- 4
Incompatible API change. The Fortran versions of the library functions return
a logical indicating success or failure. The C versions of the library functions
return an integer {0,1} for success and failure.
Some interface need an extra argument, specifying the number of matrix columns
(see the documentation)
Makefile.am
View file @
a368d0a2
...
...
@@ -11,12 +11,12 @@ libelpa@SUFFIX@_la_LINK = $(FCLINK) $(AM_LDFLAGS) -version-info $(ELPA_SO_VERSIO
libelpa@SUFFIX@
_la_SOURCES
=
src/elpa_utilities.F90
\
src/elpa1_compute.F90
\
src/elpa2_compute.F90
\
src/elpa1.F90
\
src/elpa2_utilities.F90
\
src/check_for_gpu.F90
\
src/mod_cuda.F90
\
src/interface_c_kernel.F90
\
src/elpa2_compute.F90
\
src/elpa2.F90
\
src/elpa_c_interface.F90
\
src/elpa_qr/qr_utils.f90
\
...
...
@@ -100,20 +100,30 @@ elpa_includedir = $(includedir)/elpa@SUFFIX@-@PACKAGE_VERSION@
nobase_elpa_include_HEADERS
=
$(
wildcard
modules/
*
)
nobase_elpa_include_HEADERS
+=
elpa/elpa.h elpa/elpa_kernel_constants.h elpa/elpa_generated.h
man_MANS
=
man/solve_evp_real.3
\
man/solve_evp_real_1stage.3
\
man/solve_evp_complex.3
\
man/solve_evp_complex_1stage.3
\
man/solve_evp_real_2stage.3
\
man/solve_evp_complex_2stage.3
\
man/get_elpa_row_col_comms.3
\
man/get_elpa_communicators.3
\
man/print_available_elpa2_kernels.1
# other files to distribute
filesdir
=
$(docdir)
/examples
dist_files_DATA
=
\
test
/read_real.F90
\
test
/test_complex2.F90
\
test
/test_complex2_default_kernel.F90
\
test
/test_complex2_choose_kernel_with_api.F90
\
test
/test_complex.F90
\
test
/test_real2.F90
\
test
/test_real2_default_kernel.F90
\
test
/test_real2_default_kernel_qr_decomposition.F90
\
test
/test_real2_choose_kernel_with_api.F90
\
test
/test_real.F90
\
test
/test_real_with_c.F90
\
test
/
fortran_test_programs/
read_real.F90
\
test
/
fortran_test_programs/
test_complex2.F90
\
test
/
fortran_test_programs/
test_complex2_default_kernel.F90
\
test
/
fortran_test_programs/
test_complex2_choose_kernel_with_api.F90
\
test
/
fortran_test_programs/
test_complex.F90
\
test
/
fortran_test_programs/
test_real2.F90
\
test
/
fortran_test_programs/
test_real2_default_kernel.F90
\
test
/
fortran_test_programs/
test_real2_default_kernel_qr_decomposition.F90
\
test
/
fortran_test_programs/
test_real2_choose_kernel_with_api.F90
\
test
/
fortran_test_programs/
test_real.F90
\
test
/
fortran_test_programs/
test_real_with_c.F90
\
src/print_available_elpa2_kernels.F90
dist_doc_DATA
=
README COPYING/COPYING COPYING/gpl.txt COPYING/lgpl.txt
...
...
@@ -137,6 +147,9 @@ noinst_PROGRAMS = \
elpa2_test_real_choose_kernel_with_api@SUFFIX@
\
elpa2_test_complex_choose_kernel_with_api@SUFFIX@
\
elpa1_test_real_c_version@SUFFIX@
\
elpa1_test_complex_c_version@SUFFIX@
\
elpa2_test_real_c_version@SUFFIX@
\
elpa2_test_complex_c_version@SUFFIX@
\
elpa1_test_real_with_c@SUFFIX@
...
...
@@ -155,46 +168,62 @@ shared_sources = test/shared_sources/util.F90 \
test
/shared_sources/blacs_infrastructure.F90
\
test
/shared_sources/prepare_matrix.F90
elpa1_test_real_c_version@SUFFIX@
_SOURCES
=
test
/test_real_c_version.c
$(shared_sources)
$(redirect_sources)
elpa1_test_real_c_version@SUFFIX@
_SOURCES
=
test
/
c_test_programs/elpa1_
test_real_c_version.c
$(shared_sources)
$(redirect_sources)
elpa1_test_real_c_version@SUFFIX@
_LDADD
=
$(build_lib)
elpa1_test_real_c_version@SUFFIX@
_LINK
=
$(LINK)
$(FCLIBS)
elpa1_test_real@SUFFIX@
_SOURCES
=
test
/test_real.F90
$(shared_sources)
$(redirect_sources)
elpa1_test_complex_c_version@SUFFIX@
_SOURCES
=
test
/c_test_programs/elpa1_test_complex_c_version.c
$(shared_sources)
$(redirect_sources)
elpa1_test_complex_c_version@SUFFIX@
_LDADD
=
$(build_lib)
elpa1_test_complex_c_version@SUFFIX@
_LINK
=
$(LINK)
$(FCLIBS)
elpa2_test_real_c_version@SUFFIX@
_SOURCES
=
test
/c_test_programs/elpa2_test_real_c_version.c
$(shared_sources)
$(redirect_sources)
elpa2_test_real_c_version@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_real_c_version@SUFFIX@
_LINK
=
$(LINK)
$(FCLIBS)
elpa2_test_complex_c_version@SUFFIX@
_SOURCES
=
test
/c_test_programs/elpa2_test_complex_c_version.c
$(shared_sources)
$(redirect_sources)
elpa2_test_complex_c_version@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_complex_c_version@SUFFIX@
_LINK
=
$(LINK)
$(FCLIBS)
elpa1_test_real@SUFFIX@
_SOURCES
=
test
/fortran_test_programs/test_real.F90
$(shared_sources)
$(redirect_sources)
elpa1_test_real@SUFFIX@
_LDADD
=
$(build_lib)
elpa1_test_real_with_c@SUFFIX@
_SOURCES
=
test
/test_real_with_c.F90
test
/shared_sources/mod_from_c.F90
test
/shared_sources/call_elpa1
_real
.c
$(shared_sources)
$(redirect_sources)
elpa1_test_real_with_c@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_real_with_c.F90
test
/shared_sources/mod_from_c.F90
test
/shared_sources/call_elpa1.c
$(shared_sources)
$(redirect_sources)
elpa1_test_real_with_c@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_real@SUFFIX@
_SOURCES
=
test
/test_real2.F90
$(shared_sources)
$(redirect_sources)
#elpa1_test_complex_with_c@SUFFIX@_SOURCES = test/fortran_test_programs/test_complex_with_c.F90 test/shared_sources/mod_from_c.F90 test/shared_sources/call_elpa1.c $(shared_sources) $(redirect_sources)
#elpa1_test_complex_with_c@SUFFIX@_LDADD = $(build_lib)
elpa2_test_real@SUFFIX@
_SOURCES
=
test
/fortran_test_programs/test_real2.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real@SUFFIX@
_LDFLAGS
=
-static
elpa2_test_real@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_real_default_kernel@SUFFIX@
_SOURCES
=
test
/test_real2_default_kernel.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_default_kernel@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_real2_default_kernel.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_default_kernel@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_real_default_kernel_qr_decomposition@SUFFIX@
_SOURCES
=
test
/test_real2_default_kernel_qr_decomposition.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_default_kernel_qr_decomposition@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_real2_default_kernel_qr_decomposition.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_default_kernel_qr_decomposition@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_real_choose_kernel_with_api@SUFFIX@
_SOURCES
=
test
/test_real2_choose_kernel_with_api.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_choose_kernel_with_api@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_real2_choose_kernel_with_api.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_real_choose_kernel_with_api@SUFFIX@
_LDADD
=
$(build_lib)
elpa1_test_complex@SUFFIX@
_SOURCES
=
test
/test_complex.F90
$(shared_sources)
$(redirect_sources)
elpa1_test_complex@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_complex.F90
$(shared_sources)
$(redirect_sources)
elpa1_test_complex@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_complex@SUFFIX@
_SOURCES
=
test
/test_complex2.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_complex2.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_complex_default_kernel@SUFFIX@
_SOURCES
=
test
/test_complex2_default_kernel.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex_default_kernel@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_complex2_default_kernel.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex_default_kernel@SUFFIX@
_LDADD
=
$(build_lib)
elpa2_test_complex_choose_kernel_with_api@SUFFIX@
_SOURCES
=
test
/test_complex2_choose_kernel_with_api.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex_choose_kernel_with_api@SUFFIX@
_SOURCES
=
test
/
fortran_test_programs/
test_complex2_choose_kernel_with_api.F90
$(shared_sources)
$(redirect_sources)
elpa2_test_complex_choose_kernel_with_api@SUFFIX@
_LDADD
=
$(build_lib)
...
...
@@ -206,6 +235,9 @@ check_SCRIPTS = \
elpa1_test_real.sh
\
elpa1_test_real_with_c.sh
\
elpa1_test_real_c_version.sh
\
elpa1_test_complex_c_version.sh
\
elpa2_test_real_c_version.sh
\
elpa2_test_complex_c_version.sh
\
elpa2_test_real.sh
\
elpa2_test_real_default_kernel.sh
\
elpa1_test_complex.sh
\
...
...
@@ -225,10 +257,21 @@ elpa1_test_real_with_c.sh:
echo
'mpiexec -n 2 ./elpa1_test_real_with_c@SUFFIX@ $$TEST_FLAGS'
>
elpa1_test_real_with_c.sh
chmod
+x elpa1_test_real_with_c.sh
elpa2_test_real_c_version.sh
:
echo
'mpiexec -n 2 ./elpa2_test_real_c_version@SUFFIX@ $$TEST_FLAGS'
>
elpa2_test_real_c_version.sh
chmod
+x elpa2_test_real_c_version.sh
elpa2_test_complex_c_version.sh
:
echo
'mpiexec -n 2 ./elpa2_test_complex_c_version@SUFFIX@ $$TEST_FLAGS'
>
elpa2_test_complex_c_version.sh
chmod
+x elpa2_test_complex_c_version.sh
elpa1_test_real_c_version.sh
:
echo
'mpiexec -n 2 ./elpa1_test_real_c_version@SUFFIX@ $$TEST_FLAGS'
>
elpa1_test_real_c_version.sh
chmod
+x elpa1_test_real_c_version.sh
elpa1_test_complex_c_version.sh
:
echo
'mpiexec -n 2 ./elpa1_test_complex_c_version@SUFFIX@ $$TEST_FLAGS'
>
elpa1_test_complex_c_version.sh
chmod
+x elpa1_test_complex_c_version.sh
elpa2_test_real.sh
:
echo
'mpiexec -n 2 ./elpa2_test_real@SUFFIX@ $$TEST_FLAGS'
>
elpa2_test_real.sh
chmod
+x elpa2_test_real.sh
...
...
@@ -270,6 +313,8 @@ elpa2.i: $(top_srcdir)/src/elpa2.F90
elpa1.i
:
$(top_srcdir)/src/elpa1.F90
$(CPP)
$(CPPFLAGS)
-I
$(top_builddir)
/
-I
$(top_srcdir)
/
-c
$(top_srcdir)
/src/elpa1.F90
-o
$@
include
doxygen.am
CLEANFILES
=
\
elpa/elpa-generated.h
\
elpa1_test_real.sh
\
...
...
@@ -281,6 +326,11 @@ CLEANFILES = \
elpa2_test_complex_default_kernel.sh
\
elpa2_test_real_choose_kernel_with_api.sh
\
elpa2_test_complex_choose_kernel_with_api.sh
\
elpa1_test_real_with_c.sh
\
elpa1_test_real_c_version.sh
\
elpa1_test_complex_c_version.sh
\
elpa2_test_real_c_version.sh
\
elpa2_test_complex_c_version.sh
\
*
.i
clean-local
:
...
...
@@ -291,6 +341,7 @@ distclean-local:
-
rm
-rf
./src/elpa2_kernels/.deps
-
rm
-rf
./src/.deps
-
rm
-rf
./test/.deps
-
rm
-rf
./elpa/elpa_generated.h
-
rmdir
./src/elpa2_kernels/
-
rmdir
./src
-
rmdir
./test
...
...
@@ -298,7 +349,20 @@ distclean-local:
-
rmdir
modules/
-
rmdir
.fortran_dependencies/
EXTRA_DIST
=
fdep/fortran_dependencies.pl fdep/fortran_dependencies.mk nvcc_wrap
EXTRA_DIST
=
\
fdep/fortran_dependencies.pl
\
fdep/fortran_dependencies.mk
\
src/elpa_reduce_add_vectors.X90
\
src/elpa_transpose_vectors.X90
\
src/redist_band.X90
\
nvcc_wrap
# Rules to re-generated the headers
elpa/elpa_generated.h
:
$(top_srcdir)/src/elpa_c_interface.F90
grep
-h
"^ *!c>"
$^
|
sed
's/^ *!c>//;'
>
$@
||
{
rm
$@
;
exit
1
;
}
test/shared_sources/generated.h
:
$(wildcard $(top_srcdir)/test/shared_sources/*.F90)
grep
-h
"^ *!c>"
$^
|
sed
's/^ *!c>//;'
>
$@
||
{
rm
$@
;
exit
1
;
}
LIBTOOL_DEPS
=
@LIBTOOL_DEPS@
libtool
:
$(LIBTOOL_DEPS)
...
...
RELEASE_NOTES
View file @
a368d0a2
This file contains the release notes for the ELPA 2015.
02
.001 version
This file contains the release notes for the ELPA 2015.
11
.001 version
...
...
configure.ac
View file @
a368d0a2
AC_PREREQ([2.69])
AC_INIT([elpa],[2015.
05
.001], [elpa-library@
rzg
.mpg.de])
AC_INIT([elpa],[2015.
11
.001], [elpa-library@
mpcdf
.mpg.de])
AC_SUBST([PACKAGE_VERSION])
AC_CONFIG_SRCDIR([src/elpa1.F90])
...
...
@@ -34,7 +34,7 @@ rm -rf config.h config-f90.h
# by the current interface, as they are ABI compatible (e.g. only new symbols
# were added by the new interface)
#
AC_SUBST([ELPA_SO_VERSION], [
3:1:0
])
AC_SUBST([ELPA_SO_VERSION], [
5:0:1
])
#
...
...
@@ -101,8 +101,6 @@ if test x"${enable_openmp}" = x"yes"; then
FCFLAGS="$OPENMP_FCFLAGS $FCFLAGS"
fi
# C++
AC_LANG([C++])
AC_PROG_CXX
...
...
@@ -233,6 +231,43 @@ if test "${can_compile_avx}" = "yes" ; then
fi
fi
AC_MSG_CHECKING([whether we can compile AVX2 intrinsics in C])
AC_COMPILE_IFELSE([AC_LANG_SOURCE([
#include <x86intrin.h>
int main(int argc, char **argv){
double* q;
__m256d q1 = _mm256_load_pd(q);
__m256d y1 = _mm256_fmadd_pd(q1, q1, q1);
return 0;
}
])],
[can_compile_avx2=yes],
[can_compile_avx2=no]
)
AC_MSG_RESULT([${can_compile_avx2}])
if test "${can_compile_avx2}" = "yes" ; then
AC_MSG_CHECKING([whether we can compile AVX2 intrinsics in C++])
AC_LANG_PUSH([C++])
AC_COMPILE_IFELSE([AC_LANG_SOURCE([
#include <x86intrin.h>
int main(int argc, char **argv){
double* q;
__m256d q1 = _mm256_load_pd(q);
__m256d y1 = _mm256_fmadd_pd(q1, q1, q1);
return 0;
}
])],
[can_compile_avx2=yes],
[can_compile_avx2=no]
)
AC_LANG_POP([C++])
AC_MSG_RESULT([${can_compile_avx2}])
if test "${can_compile_avx2}" = "no" ; then
AC_MSG_WARN([Cannot compile C++ with AVX2!])
fi
fi
if test "${can_compile_avx}" = "yes" ; then
install_real_avx_block2=yes
install_real_avx_block4=yes
...
...
@@ -507,8 +542,8 @@ AC_MSG_CHECKING([whether we can compile with BGQ intrinsics])
AC_LINK_IFELSE([AC_LANG_SOURCE([
program test_bgq
VECTOR(REAL(8))::QPX_
x
2
real*8 :: hh(10,2)
)
VECTOR(REAL(8))::QPX_
h
2
real*8
:: hh(10,2)
QPX_h2 = VEC_SPLATS(hh(2,2))
end program
...
...
@@ -670,16 +705,22 @@ if test x"${install_real_bgq}" = x"yes" ; then
AC_DEFINE([WITH_REAL_BGQ_KERNEL],[1],[can use real BGQ kernel])
fi
if test x"${use_specific_complex_kernel}" = x"
yes
" ; then
AC_DEFINE([WITH_O
NE
_SPECIFIC_COMPLEX_KERNEL],[1],[use only one specific complex kernel (set at compile time)])
if test x"${use_specific_complex_kernel}" = x"
no
" ; then
AC_DEFINE([WITH_
N
O_SPECIFIC_COMPLEX_KERNEL],[1],[
do not
use only one specific complex kernel (set at compile time)])
fi
if test x"${use_specific_real_kernel}" = x"
yes
" ; then
AC_DEFINE([WITH_O
NE
_SPECIFIC_REAL_KERNEL],[1],[use only one specific real kernel (set at compile time)])
if test x"${use_specific_real_kernel}" = x"
no
" ; then
AC_DEFINE([WITH_
N
O_SPECIFIC_REAL_KERNEL],[1],[
do not
use only one specific real kernel (set at compile time)])
fi
LT_INIT
DX_PDF_FEATURE(OFF)
DX_PS_FEATURE(OFF)
DX_MAN_FEATURE(ON)
DX_HTML_FEATURE(ON)
DX_INIT_DOXYGEN([ELPA], [Doxyfile], [docs])
AC_SUBST([WITH_MKL])
AC_SUBST([WITH_BLACS])
AC_SUBST([with_amd_bulldozer_kernel])
...
...
@@ -689,6 +730,7 @@ AC_SUBST([OPENMP_CFLAGS])
AC_SUBST([OPENMP_FCFLAGS])
AC_SUBST([OPENMP_LDFLAGS])
#AC_SUBST(OPT_FCFLAGS)
AC_SUBST([DOXYGEN_OUTPUT_DIR], [docs])
rm -rf modules/ .fortran_dependencies/
mkdir modules
...
...
@@ -722,6 +764,7 @@ AC_SUBST([PKG_CONFIG_FILE],[elpa${SUFFIX}-${PACKAGE_VERSION}.pc])
AC_CONFIG_FILES([
Makefile
Doxyfile
${PKG_CONFIG_FILE}:elpa.pc.in
])
...
...
@@ -737,10 +780,19 @@ fi
echo "Generating elpa/elpa_generated.h..."
mkdir -p elpa
grep "^ *!c>" $srcdir/src/elpa_c_interface.F90 | sed 's/^ *!c>//;' > elpa/elpa_generated.h || exit 1
grep -h "^ *!c>" $srcdir/src/elpa_c_interface.F90 | sed 's/^ *!c>//;' > elpa/elpa_generated.h || exit 1
echo "Generating test/shared_sources/generated.h..."
mkdir -p test/shared_sources
grep -h "^ *!c>" $srcdir/test/shared_sources/*.F90 | sed 's/^ *!c>//;' > test/shared_sources/generated.h || exit 1
if test "${can_compile_avx}" = "no" ; then
if test x"${want_avx}" = x"yes" ; then
AC_MSG_WARN([Could not compile AVX instructions])
fi
fi
if test "${can_compile_avx2}" = "no" ; then
if test x"${want_avx}" = x"yes" ; then
AC_MSG_WARN([Could not compile AVX2 instructions])
fi
fi
doxygen.am
0 → 100644
View file @
a368d0a2
## --------------------------------- ##
## Format-independent Doxygen rules. ##
## --------------------------------- ##
if DX_COND_doc
## ------------------------------- ##
## Rules specific for HTML output. ##
## ------------------------------- ##
if DX_COND_html
DX_CLEAN_HTML = @DX_DOCDIR@/html
endif DX_COND_html
## ------------------------------ ##
## Rules specific for CHM output. ##
## ------------------------------ ##
if DX_COND_chm
DX_CLEAN_CHM = @DX_DOCDIR@/chm
if DX_COND_chi
DX_CLEAN_CHI = @DX_DOCDIR@/@PACKAGE@.chi
endif DX_COND_chi
endif DX_COND_chm
## ------------------------------ ##
## Rules specific for MAN output. ##
## ------------------------------ ##
if DX_COND_man
DX_CLEAN_MAN = @DX_DOCDIR@/man
endif DX_COND_man
## ------------------------------ ##
## Rules specific for RTF output. ##
## ------------------------------ ##
if DX_COND_rtf
DX_CLEAN_RTF = @DX_DOCDIR@/rtf
endif DX_COND_rtf
## ------------------------------ ##
## Rules specific for XML output. ##
## ------------------------------ ##
if DX_COND_xml
DX_CLEAN_XML = @DX_DOCDIR@/xml
endif DX_COND_xml
## ----------------------------- ##
## Rules specific for PS output. ##
## ----------------------------- ##
if DX_COND_ps
DX_CLEAN_PS = @DX_DOCDIR@/@PACKAGE@.ps
DX_PS_GOAL = doxygen-ps
doxygen-ps: @DX_DOCDIR@/@PACKAGE@.ps
@DX_DOCDIR@/@PACKAGE@.ps: @DX_DOCDIR@/@PACKAGE@.tag
cd @DX_DOCDIR@/latex; \
rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \
$(DX_LATEX) refman.tex; \
$(MAKEINDEX_PATH) refman.idx; \
$(DX_LATEX) refman.tex; \
countdown=5; \
while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \
refman.log > /dev/null 2>&1 \
&& test $$countdown -gt 0; do \
$(DX_LATEX) refman.tex; \
countdown=`expr $$countdown - 1`; \
done; \
$(DX_DVIPS) -o ../@PACKAGE@.ps refman.dvi
endif DX_COND_ps
## ------------------------------ ##
## Rules specific for PDF output. ##
## ------------------------------ ##
if DX_COND_pdf
DX_CLEAN_PDF = @DX_DOCDIR@/@PACKAGE@.pdf
DX_PDF_GOAL = doxygen-pdf
doxygen-pdf: @DX_DOCDIR@/@PACKAGE@.pdf
@DX_DOCDIR@/@PACKAGE@.pdf: @DX_DOCDIR@/@PACKAGE@.tag
cd @DX_DOCDIR@/latex; \
rm -f *.aux *.toc *.idx *.ind *.ilg *.log *.out; \
$(DX_PDFLATEX) refman.tex; \
$(DX_MAKEINDEX) refman.idx; \
$(DX_PDFLATEX) refman.tex; \
countdown=5; \
while $(DX_EGREP) 'Rerun (LaTeX|to get cross-references right)' \
refman.log > /dev/null 2>&1 \
&& test $$countdown -gt 0; do \
$(DX_PDFLATEX) refman.tex; \
countdown=`expr $$countdown - 1`; \
done; \
mv refman.pdf ../@PACKAGE@.pdf
endif DX_COND_pdf
## ------------------------------------------------- ##
## Rules specific for LaTeX (shared for PS and PDF). ##
## ------------------------------------------------- ##
if DX_COND_latex
DX_CLEAN_LATEX = @DX_DOCDIR@/latex
endif DX_COND_latex
.PHONY: doxygen-run doxygen-doc $(DX_PS_GOAL) $(DX_PDF_GOAL)
.INTERMEDIATE: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL)
doxygen-run: @DX_DOCDIR@/@PACKAGE@.tag
doxygen-doc: doxygen-run $(DX_PS_GOAL) $(DX_PDF_GOAL)
@DX_DOCDIR@/@PACKAGE@.tag: $(DX_CONFIG) $(pkginclude_HEADERS)
rm -rf @DX_DOCDIR@
$(DX_ENV) $(DX_DOXYGEN) $(DX_CONFIG)
DX_CLEANFILES = \
@DX_DOCDIR@/@PACKAGE@.tag \
-r \
$(DX_CLEAN_HTML) \
$(DX_CLEAN_CHM) \
$(DX_CLEAN_CHI) \
$(DX_CLEAN_MAN) \
$(DX_CLEAN_RTF) \
$(DX_CLEAN_XML) \
$(DX_CLEAN_PS) \
$(DX_CLEAN_PDF) \
$(DX_CLEAN_LATEX)
endif DX_COND_doc
