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Commit 6533d046 authored by Andreas Marek's avatar Andreas Marek
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Fix some errors when building tests

parent 8facab5a
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.gitlab-ci.yml
View file @ 6533d046
......@@ -60,7 +60,7 @@ distcheck:
- distcheck
script:
- ./ci_test_scripts/run_ci_tests.sh -c " CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 || { cat config.log; exit 1; } " -t $MPI_TASKS -m 150 -n 50 -b 16 -s $SKIP_STEP -i $INTERACTIVE_RUN -S $SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " -d " CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\\\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\\\" SCALAPACK_FCFLAGS=\\\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\\\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
 
 
 
......@@ -69,7 +69,7 @@ distcheck-mpi:
- distcheck
script:
- ./ci_test_scripts/run_ci_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 || { cat config.log; exit 1; } " -t $MPI_TASKS -m 150 -n 50 -b 16 -s $SKIP_STEP -i $INTERACTIVE_RUN -S $SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " -d " FC=mpiifort FCFLAGS=\\\"-xHost\\\" CFLAGS=\\\"-march=native\\\" SCALAPACK_LDFLAGS=\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\" SCALAPACK_FCFLAGS=\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 " - -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
 
 
 
......@@ -78,7 +78,7 @@ distcheck-no-autotune:
- distcheck
script:
- ./ci_test_scripts/run_ci_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning || { cat config.log; exit 1; } " -t $MPI_TASKS -m 150 -n 50 -b 16 -s $SKIP_STEP -i $INTERACTIVE_RUN -S $SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning " -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
- ./ci_test_scripts/run_distcheck_tests.sh -c " FC=mpiifort FCFLAGS=\"-xHost\" CFLAGS=\"-march=native\" SCALAPACK_LDFLAGS=\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\" SCALAPACK_FCFLAGS=\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning " -d " FC=mpiifort FCFLAGS=\\\"-xHost\\\" CFLAGS=\\\"-march=native\\\" SCALAPACK_LDFLAGS=\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\" SCALAPACK_FCFLAGS=\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\" --enable-option-checking=fatal --with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning " -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM
 
 
 
......@@ -100,7 +100,7 @@ python-distcheck:
- ./ci_test_scripts/run_ci_tests.sh -c "CC=\"mpiicc\" CFLAGS=\"-O3 -xAVX\" FC="mpiifort" FCFLAGS=\"-O3 -xAVX\" SCALAPACK_LDFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP\" SCALAPACK_FCFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP\" --enable-option-checking=fatal --with-mpi=yes --enable-openmp --disable-gpu --enable-avx --enable-python --enable-python-tests || { cat config.log; exit 1; }" -j 8 -t $MPI_TASKS -m 150 -n 50 -b 16 -s $SKIP_STEP -i $INTERACTIVE_RUN -S $SLURM
 
 
- ./ci_test_scripts/run_distcheck_tests.sh -c "CC=\"mpiicc\" CFLAGS=\"-O3 -xAVX\" FC=\"mpiifort\" FCFLAGS=\"-O3 -xAVX\" SCALAPACK_LDFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP \" SCALAPACK_FCFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP \" --enable-option-checking=fatal --with-mpi=yes --enable-openmp --disable-gpu --enable-avx --enable-python --enable-python-tests" -t $MPI_TASKS -m 150 -n 50 -b 16 -S $SLURM || { chmod u+rwX -R . ; exit 1 ; }
- ./ci_test_scripts/run_distcheck_tests.sh -c "CC=\"mpiicc\" CFLAGS=\"-O3 -xAVX\" FC=\"mpiifort\" FCFLAGS=\"-O3 -xAVX\" SCALAPACK_LDFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP \" SCALAPACK_FCFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP \" --enable-option-checking=fatal --with-mpi=yes --enable-openmp --disable-gpu --enable-avx --enable-python --enable-python-tests "-d " CC=\\\"mpiicc\\\" CFLAGS=\\\"-O3 -xAVX\\\" FC=\\\"mpiifort\\\" FCFLAGS=\\\"-O3 -xAVX\\\" SCALAPACK_LDFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP \" SCALAPACK_FCFLAGS=\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP \" --enable-option-checking=fatal --with-mpi=yes --enable-openmp --disable-gpu --enable-avx --enable-python --enable-python-tests" -t $MPI_TASKS -m 150 -n 50 -b 16 -S $SLURM || { chmod u+rwX -R . ; exit 1 ; }
 
 
# test_project_1stage_legacy_api_gnu
......
ci_test_scripts/generate_gitlab_ci_tests.py
View file @ 6533d046
......@@ -286,6 +286,8 @@ print(" - ./ci_test_scripts/run_ci_tests.sh -c \" CC=gcc FC=gfortran SCALAPAC
--disable-sse --disable-avx --disable-avx2 || { cat config.log; exit 1; } \" -t $MPI_TASKS -m 150 -n 50 -b 16 -s $SKIP_STEP -i $INTERACTIVE_RUN -S $SLURM ")
print(" - ./ci_test_scripts/run_distcheck_tests.sh -c \" CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\\\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\\\" \
SCALAPACK_FCFLAGS=\\\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\\\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly \
--disable-sse --disable-avx --disable-avx2 \" -d \" CC=gcc FC=gfortran SCALAPACK_LDFLAGS=\\\\\\\"$MKL_GFORTRAN_SCALAPACK_LDFLAGS_NO_MPI_NO_OMP\\\\\\\" \
SCALAPACK_FCFLAGS=\\\\\\\"$MKL_GFORTRAN_SCALAPACK_FCFLAGS_NO_MPI_NO_OMP\\\\\\\" --enable-option-checking=fatal --with-mpi=no --disable-sse-assembly \
--disable-sse --disable-avx --disable-avx2 \" -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM ")
print("\n\n")
......@@ -302,6 +304,9 @@ print(" - ./ci_test_scripts/run_ci_tests.sh -c \" FC=mpiifort FCFLAGS=\\\"-xH
print(" - ./ci_test_scripts/run_distcheck_tests.sh -c \" FC=mpiifort FCFLAGS=\\\"-xHost\\\" \
CFLAGS=\\\"-march=native\\\" SCALAPACK_LDFLAGS=\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\" \
SCALAPACK_FCFLAGS=\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\" --enable-option-checking=fatal \
--with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 \" -d \" FC=mpiifort FCFLAGS=\\\\\\\"-xHost\\\\\\\" \
CFLAGS=\\\\\\\"-march=native\\\\\\\" SCALAPACK_LDFLAGS=\\\\\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\\\\\" \
SCALAPACK_FCFLAGS=\\\\\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\\\\\" --enable-option-checking=fatal \
--with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 \" -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM ")
print("\n\n")
......@@ -318,6 +323,9 @@ print(" - ./ci_test_scripts/run_ci_tests.sh -c \" FC=mpiifort FCFLAGS=\\\"-xH
print(" - ./ci_test_scripts/run_distcheck_tests.sh -c \" FC=mpiifort FCFLAGS=\\\"-xHost\\\" \
CFLAGS=\\\"-march=native\\\" SCALAPACK_LDFLAGS=\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\" \
SCALAPACK_FCFLAGS=\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\" --enable-option-checking=fatal \
--with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning \" -d \" FC=mpiifort FCFLAGS=\\\\\\\"-xHost\\\\\\\" \
CFLAGS=\\\\\\\"-march=native\\\\\\\" SCALAPACK_LDFLAGS=\\\\\\\"$MKL_INTEL_SCALAPACK_LDFLAGS_MPI_NO_OMP\\\\\\\" \
SCALAPACK_FCFLAGS=\\\\\\\"$MKL_INTEL_SCALAPACK_FCFLAGS_MPI_NO_OMP\\\\\\\" --enable-option-checking=fatal \
--with-mpi=yes --disable-sse-assembly --disable-sse --disable-avx --disable-avx2 --disable-autotuning \" -t $MPI_TASKS -m 150 -n 50 -b 16 -S$SLURM ")
print("\n\n")
......@@ -365,6 +373,12 @@ python_ci_tests = [
'SCALAPACK_LDFLAGS=\\\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP \\\" '
'SCALAPACK_FCFLAGS=\\\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP \\\" '
'--enable-option-checking=fatal --with-mpi=yes --enable-openmp '
'--disable-gpu --enable-avx --enable-python --enable-python-tests "'
'-d " CC=\\\\\\\"mpiicc\\\\\\\" CFLAGS=\\\\\\\"-O3 -xAVX\\\\\\\" '
'FC=\\\\\\\"mpiifort\\\\\\\" FCFLAGS=\\\\\\\"-O3 -xAVX\\\\\\\" '
'SCALAPACK_LDFLAGS=\\\"$MKL_ANACONDA_INTEL_SCALAPACK_LDFLAGS_MPI_OMP \\\" '
'SCALAPACK_FCFLAGS=\\\"$MKL_ANACONDA_INTEL_SCALAPACK_FCFLAGS_MPI_OMP \\\" '
'--enable-option-checking=fatal --with-mpi=yes --enable-openmp '
'--disable-gpu --enable-avx --enable-python --enable-python-tests'
'" -t $MPI_TASKS -m 150 -n 50 -b 16 -S $SLURM || { chmod u+rwX -R . ; exit 1 ; }',
"\n",
......
ci_test_scripts/run_distcheck_tests.sh
View file @ 6533d046
......@@ -19,11 +19,15 @@ function usage() {
Call all the necessary steps to perform an ELPA CI test
Usage:
run_distcheck_tests [-c configure arguments] [-h] [-t MPI Tasks] [-m matrix size] [-n number of eigenvectors] [-b block size] [-o OpenMP threads] [-q submit command] [-S submit to Slurm] [-g GPU job]"
run_distcheck_tests [-c configure arguments] [-d distcheck configure arguments] [-h] [-t MPI Tasks] [-m matrix size] [-n number of eigenvectors] [-b block size] [-o OpenMP threads] [-q submit command] [-S submit to Slurm] [-g GPU job]"
Options:
-c configure arguments
Line of arguments passed to configure call
-d configure arguments to distcheck
Line of arguments passed to distcheck configure call
-t MPI Tasks
Number of MPI processes used during test runs of ELPA tests
......@@ -54,7 +58,7 @@ function usage() {
}
while getopts "c:t:j:m:n:b:o:s:q:i:S:g:h" opt; do
while getopts "c:d:t:j:m:n:b:o:s:q:i:S:g:h" opt; do
case $opt in
t)
mpiTasks=$OPTARG;;
......@@ -68,6 +72,9 @@ while getopts "c:t:j:m:n:b:o:s:q:i:S:g:h" opt; do
ompThreads=$OPTARG;;
c)
configureArgs=$OPTARG;;
d)
distcheckConfigureArgs=$OPTARG;;
q)
batchCommand=$OPTARG;;
S)
......@@ -117,7 +124,7 @@ then
echo "./configure " "$configureArgs" " || { cat config.log; exit 1; }" >> ./run_${CLUSTER}_1node.sh
echo " " >> ./run_${CLUSTER}_1node.sh
echo "export TASKS=$mpiTasks" >> ./run_${CLUSTER}_1node.sh
echo "export DISTCHECK_CONFIGURE_FLAGS=\" $configureArgs \" " >> ./run_${CLUSTER}_1node.sh
echo "export DISTCHECK_CONFIGURE_FLAGS=\" $distcheckConfigureArgs \" " >> ./run_${CLUSTER}_1node.sh
echo "make distcheck TEST_FLAGS=\" $matrixSize $nrEV $blockSize \" || { chmod u+rwX -R . ; exit 1 ; } " >> ./run_${CLUSTER}_1node.sh
echo " " >> ./run_${CLUSTER}_1node.sh
echo "#copy everything back from /tmp/elpa to runner directory" >> ./run_${CLUSTER}_1node.sh
......
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