none

survseq_1.0.R

@@ -4,6 +4,16 @@ library(dplyr)
 library(BiasedUrn)
 library(ggpubr)
 
+#this is the only bioconductor package  - for visualization
+if (!requireNamespace("BiocManager", quietly = TRUE))
+  install.packages("BiocManager")
+
+BiocManager::install("ggbio")
+
+#this is because hashmap is not in CRAN anymore (only used for simple visualization)
+library(devtools)
+install_local("hashmap_0.2.2.tar.gz")
+
 #local functions
 source("include/misc.R")
 source("include/read_genotype_probabilities.R")