GitLab

Ptconv

See merge request pschuber/SyConn!36

* fix for gitlab-runner freeze: remove pytest `--forked` flag
* add `map_myelin` flag to `run_skeleton_generation`

Improvements and updated SyConn/examples

See merge request pschuber/SyConn!35

* fix for gitlab-runner freeze: remove pytest `--forked` flag
* add `map_myelin` flag to `run_skeleton_generation`

* fix for gitlab-runner freeze: remove pytest `--forked` flag
* add `map_myelin` flag to `run_skeleton_generation`

exclude `test_models_e3.py` which currently leads to freezes in gutlab runners after successful tests

 Conflicts:
	scripts/dataset_specific/start_j0251.py
	syconn/batchjob_scripts/batchjob_generate_morphology_embedding.py
	syconn/exec/exec_syns.py
	syconn/reps/rep_helper.py

* most steps which are independent are now performed in parallel
* fix wrong arg in batchjob_kimimaromerge.py
* improve batchjob folder removal (cf. batchjob_utils.py)

 Conflicts:
	syconn/exec/exec_skeleton.py
	syconn/proc/skeleton.py

improve readability in cs_processing_steps.py; remove incorrect consistency check in `combine_and_split_syn`

 Conflicts:
	syconn/exec/exec_skeleton.py

 Conflicts:
	syconn/exec/exec_skeleton.py
	syconn/mp/batchjob_utils.py
	syconn/reps/super_segmentation_helper.py

 Conflicts:
	syconn/batchjob_scripts/batchjob_predict_axoness_semseg.py
	syconn/exec/exec_skeleton.py
	syconn/handler/prediction_pts.py