diff --git a/README.md b/README.md index 02e0ecc7947feeb985983cc6aa2d4e6823b56d04..2feb667dc16e858f7ffb6eb57350216b8b836fa4 100644 --- a/README.md +++ b/README.md @@ -24,11 +24,10 @@ this package: ```sh git clone https://gitlab.mpcdf.mpg.de/nomad-lab/python-common.git cd python-common -pip install -r requirements.txt pip install -e . ``` -Then download the metainfo definitions to the same folder where the +Then download the metainfo definitions into the same folder where the 'python-common' repository was cloned: ```sh diff --git a/nomadcore.egg-info/SOURCES.txt b/nomadcore.egg-info/SOURCES.txt index 249c01751cdf1b0d1530c6a1edb03d0336eaf8fb..8730a43bca7f623ecd9065869221b75413468e15 100644 --- a/nomadcore.egg-info/SOURCES.txt +++ b/nomadcore.egg-info/SOURCES.txt @@ -26,7 +26,6 @@ nomadcore/parsing/annotator.py nomadcore/parsing/baseclasses.py nomadcore/parsing/basic_meta_info.py nomadcore/parsing/caching_backend.py -nomadcore/parsing/compact_sha.py nomadcore/parsing/configurationreading.py nomadcore/parsing/csvparsing.py nomadcore/parsing/local_backend.py @@ -42,5 +41,6 @@ nomadcore/utils/GromosTopoObjects.py nomadcore/utils/MDDataAccess.py nomadcore/utils/__init__.py nomadcore/utils/activatelogging.py +nomadcore/utils/compact_sha.py nomadcore/utils/json_support.py nomadcore/utils/utils.py \ No newline at end of file diff --git a/nomadcore/constants/MetaData.txt b/nomadcore/constants/metadata.txt similarity index 100% rename from nomadcore/constants/MetaData.txt rename to nomadcore/constants/metadata.txt diff --git a/nomadcore/metainfo/calculate_meta_info_overrides.py b/nomadcore/metainfo/calculate_metainfo_overrides.py similarity index 100% rename from nomadcore/metainfo/calculate_meta_info_overrides.py rename to nomadcore/metainfo/calculate_metainfo_overrides.py diff --git a/nomadcore/metainfo/load_meta_info.py b/nomadcore/metainfo/load_metainfo.py similarity index 100% rename from nomadcore/metainfo/load_meta_info.py rename to nomadcore/metainfo/load_metainfo.py diff --git a/nomadcore/metainfo/local_meta_info.py b/nomadcore/metainfo/local_metainfo.py similarity index 100% rename from nomadcore/metainfo/local_meta_info.py rename to nomadcore/metainfo/local_metainfo.py diff --git a/nomadcore/parsing/model_meta_info.py b/nomadcore/metainfo/model_metainfo.py similarity index 100% rename from nomadcore/parsing/model_meta_info.py rename to nomadcore/metainfo/model_metainfo.py diff --git a/nomadcore/metainfo/normalize_meta_info.py b/nomadcore/metainfo/normalize_metainfo.py similarity index 100% rename from nomadcore/metainfo/normalize_meta_info.py rename to nomadcore/metainfo/normalize_metainfo.py diff --git a/nomadcore/parsing/baseclasses.py b/nomadcore/parsing/base_classes.py similarity index 99% rename from nomadcore/parsing/baseclasses.py rename to nomadcore/parsing/base_classes.py index d6f791f7c871883fac0080055e2c1af9f4424bea..fa5c54378ac10f1fb2e2dc9dedd720be8da59d8d 100644 --- a/nomadcore/parsing/baseclasses.py +++ b/nomadcore/parsing/base_classes.py @@ -13,11 +13,11 @@ from abc import ABCMeta, abstractmethod from nomadcore.parsing import unit_conversion from nomadcore.parsing.simple_parser import mainFunction from nomadcore.parsing.local_backend import LocalBackend -from nomadcore.metainfo.local_meta_info import load_metainfo +from nomadcore.metainfo.local_metainfo import load_metainfo from nomadcore.parsing.caching_backend import CachingLevel from nomadcore.parsing.simple_parser import extractOnCloseTriggers, extractOnOpenTriggers from nomadcore.parsing.caching_backend import ActiveBackend -import nomadcore.utils.activatelogging +import nomadcore.utils.activate_logging from future.utils import with_metaclass logger = logging.getLogger("nomad") diff --git a/nomadcore/parsing/basic_meta_info.py b/nomadcore/parsing/basic_metainfo.py similarity index 100% rename from nomadcore/parsing/basic_meta_info.py rename to nomadcore/parsing/basic_metainfo.py diff --git a/nomadcore/parsing/configurationreading.py b/nomadcore/parsing/coordinate_reader.py similarity index 100% rename from nomadcore/parsing/configurationreading.py rename to nomadcore/parsing/coordinate_reader.py diff --git a/nomadcore/parsing/csvparsing.py b/nomadcore/parsing/csv_reader.py similarity index 100% rename from nomadcore/parsing/csvparsing.py rename to nomadcore/parsing/csv_reader.py diff --git a/nomadcore/utils/GromosTopoObjects.py b/nomadcore/parsing/gromos_topo_objects.py similarity index 100% rename from nomadcore/utils/GromosTopoObjects.py rename to nomadcore/parsing/gromos_topo_objects.py diff --git a/nomadcore/utils/MDDataAccess.py b/nomadcore/parsing/md_data_access.py similarity index 100% rename from nomadcore/utils/MDDataAccess.py rename to nomadcore/parsing/md_data_access.py diff --git a/nomadcore/parsing/MetaInfoStorage.py b/nomadcore/parsing/metainfo_storage.py similarity index 100% rename from nomadcore/parsing/MetaInfoStorage.py rename to nomadcore/parsing/metainfo_storage.py diff --git a/nomadcore/parsing/SmartParserCommon.py b/nomadcore/parsing/smart_parser_common.py similarity index 100% rename from nomadcore/parsing/SmartParserCommon.py rename to nomadcore/parsing/smart_parser_common.py diff --git a/nomadcore/parsing/SmartParserDictionary.py b/nomadcore/parsing/smart_parser_dictionary.py similarity index 100% rename from nomadcore/parsing/SmartParserDictionary.py rename to nomadcore/parsing/smart_parser_dictionary.py diff --git a/nomadcore/utils/activatelogging.py b/nomadcore/utils/activate_logging.py similarity index 100% rename from nomadcore/utils/activatelogging.py rename to nomadcore/utils/activate_logging.py