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parser-namd
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nomad-lab
parser-namd
Commits
142035dd
Commit
142035dd
authored
Jan 22, 2018
by
Berk Onat
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Typo in the Scala names for the parser
parent
1702161e
Pipeline
#23901
failed with stage
in 10 minutes and 40 seconds
Changes
2
Pipelines
1
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2 changed files
with
11 additions
and
11 deletions
+11
-11
src/main/scala/eu/nomad_lab/parsers/NAMDParser.scala
src/main/scala/eu/nomad_lab/parsers/NAMDParser.scala
+6
-6
src/test/scala/eu/nomad_lab/parsers/NAMDParserSpec.scala
src/test/scala/eu/nomad_lab/parsers/NAMDParserSpec.scala
+5
-5
No files found.
src/main/scala/eu/nomad_lab/parsers/NAMDParser.scala
View file @
142035dd
...
...
@@ -6,16 +6,16 @@ import org.{ json4s => jn }
import
eu.
{
nomad_lab
=>
lab
}
import
scala.collection.breakOut
object
N
AMD
Parser
extends
SimpleExternalParserGenerator
(
name
=
"N
AMD
Parser"
,
object
N
amd
Parser
extends
SimpleExternalParserGenerator
(
name
=
"N
amd
Parser"
,
parserInfo
=
jn
.
JObject
(
(
"name"
->
jn
.
JString
(
"N
AMD
Parser"
))
::
(
"parserId"
->
jn
.
JString
(
"N
AMDParser"
+
lab
.
NAMD
VersionInfo
.
version
))
::
(
"name"
->
jn
.
JString
(
"N
amd
Parser"
))
::
(
"parserId"
->
jn
.
JString
(
"N
amdParser"
+
lab
.
Namd
VersionInfo
.
version
))
::
(
"versionInfo"
->
jn
.
JObject
(
(
"nomadCoreVersion"
->
jn
.
JObject
(
lab
.
NomadCoreVersionInfo
.
toMap
.
map
{
case
(
k
,
v
)
=>
k
->
jn
.
JString
(
v
.
toString
)
}(
breakOut
)
:
List
[(
String
,
jn.JString
)]))
::
(
lab
.
N
AMD
VersionInfo
.
toMap
.
map
{
(
lab
.
N
amd
VersionInfo
.
toMap
.
map
{
case
(
key
,
value
)
=>
(
key
->
jn
.
JString
(
value
.
toString
))
}(
breakOut
)
:
List
[(
String
,
jn.JString
)])
...
...
@@ -33,7 +33,7 @@ object NAMDParser extends SimpleExternalParserGenerator(
"nomad_meta_info/public.nomadmetainfo.json"
,
"nomad_meta_info/common.nomadmetainfo.json"
,
"nomad_meta_info/meta_types.nomadmetainfo.json"
,
"nomad_meta_info/namd.nomadmetainfo.json"
,
"nomad_meta_info/namd.nomadmetainfo.json"
)
++
DefaultPythonInterpreter
.
commonFiles
(),
dirMap
=
Map
(
"parser-namd"
->
"parsers/namd/parser/parser-namd"
,
...
...
src/test/scala/eu/nomad_lab/parsers/NAMDParserSpec.scala
View file @
142035dd
...
...
@@ -2,19 +2,19 @@ package eu.nomad_lab.parsers
import
org.specs2.mutable.Specification
object
N
AMD
ParserTests
extends
Specification
{
object
N
amd
ParserTests
extends
Specification
{
"NAMDParserTest"
>>
{
"[tiny with 507 atoms] test with json-events"
>>
{
ParserRun
.
parse
(
N
AMD
Parser
,
"parsers/namd/test/examples/tiny/tiny.log"
,
"json-events"
)
must_==
ParseResult
.
ParseSuccess
ParserRun
.
parse
(
N
amd
Parser
,
"parsers/namd/test/examples/tiny/tiny.log"
,
"json-events"
)
must_==
ParseResult
.
ParseSuccess
}
"[tiny with 507 atoms] test with json"
>>
{
ParserRun
.
parse
(
N
AMD
Parser
,
"parsers/namd/test/examples/tiny/tiny.log"
,
"json"
)
must_==
ParseResult
.
ParseSuccess
ParserRun
.
parse
(
N
amd
Parser
,
"parsers/namd/test/examples/tiny/tiny.log"
,
"json"
)
must_==
ParseResult
.
ParseSuccess
}
"[apoa1-trajectory with 92224 atoms] test with json-events"
>>
{
ParserRun
.
parse
(
N
AMD
Parser
,
"parsers/namd/test/examples/apoa1-trajectory/apoa1.log"
,
"json-events"
)
must_==
ParseResult
.
ParseSuccess
ParserRun
.
parse
(
N
amd
Parser
,
"parsers/namd/test/examples/apoa1-trajectory/apoa1.log"
,
"json-events"
)
must_==
ParseResult
.
ParseSuccess
}
"[apoa1-trajectory with 92224 atoms] test with json"
>>
{
ParserRun
.
parse
(
N
AMD
Parser
,
"parsers/namd/test/examples/apoa1-trajectory/apoa1.log"
,
"json"
)
must_==
ParseResult
.
ParseSuccess
ParserRun
.
parse
(
N
amd
Parser
,
"parsers/namd/test/examples/apoa1-trajectory/apoa1.log"
,
"json"
)
must_==
ParseResult
.
ParseSuccess
}
}
}
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