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nomad-lab
parser-gpaw
Commits
05116df7
Commit
05116df7
authored
May 17, 2016
by
Mohamed, Fawzi Roberto (fawzi)
Browse files
more renames from web_public
parent
506e2d67
Changes
1
Hide whitespace changes
Inline
Side-by-side
parser/parser-gpaw/parser.py
View file @
05116df7
...
...
@@ -60,8 +60,8 @@ def parse(filename):
with
o
(
p
,
'section_system'
):
p
.
addArrayValues
(
'simulation_cell'
,
c
(
r
.
UnitCell
,
'bohr'
))
symbols
=
np
.
array
([
chemical_symbols
[
z
]
for
z
in
r
.
AtomicNumbers
])
p
.
addArrayValues
(
'atom_label'
,
symbols
)
p
.
addArrayValues
(
'atom_position'
,
c
(
r
.
CartesianPositions
,
'bohr'
))
p
.
addArrayValues
(
'atom_label
s
'
,
symbols
)
p
.
addArrayValues
(
'atom_position
s
'
,
c
(
r
.
CartesianPositions
,
'bohr'
))
p
.
addArrayValues
(
'configuration_periodic_dimensions'
,
np
.
array
(
r
.
BoundaryConditions
,
bool
))
with
o
(
p
,
'section_single_configuration_calculation'
):
...
...
@@ -80,7 +80,7 @@ def parse(filename):
with
o
(
p
,
'section_eigenvalues_group'
):
for
eps_kn
,
occ_kn
in
zip
(
r
.
Eigenvalues
,
r
.
OccupationNumbers
):
with
o
(
p
,
'section_eigenvalues'
):
p
.
addArrayValues
(
'eigenvalues_
eigen
values'
,
p
.
addArrayValues
(
'eigenvalues_values'
,
c
(
eps_kn
,
'hartree'
))
p
.
addArrayValues
(
'eigenvalues_occupation'
,
occ_kn
)
p
.
addArrayValues
(
'eigenvalues_kpoints'
,
r
.
IBZKPoints
)
...
...
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