import numpy as np # pylint: disable=unused-import import typing # pylint: disable=unused-import from nomad.metainfo import ( # pylint: disable=unused-import MSection, MCategory, Category, Package, Quantity, Section, SubSection, SectionProxy, Reference ) from nomad.metainfo.legacy import LegacyDefinition from nomad.datamodel.metainfo import public m_package = Package( name='dl_poly_nomadmetainfo_json', description='None', a_legacy=LegacyDefinition(name='dl_poly.nomadmetainfo.json')) class x_dl_poly_section_md_molecule_type(MSection): ''' Section to store molecule type information ''' m_def = Section(validate=False, a_legacy=LegacyDefinition(name='x_dl_poly_section_md_molecule_type')) x_dl_poly_md_molecule_type_id = Quantity( type=np.dtype(np.int32), shape=[], description=''' Molecule type id ''', a_legacy=LegacyDefinition(name='x_dl_poly_md_molecule_type_id')) x_dl_poly_md_molecule_type_name = Quantity( type=str, shape=[], description=''' Molecule type name ''', a_legacy=LegacyDefinition(name='x_dl_poly_md_molecule_type_name')) class x_dl_poly_section_md_topology(MSection): ''' Section modelling the MD topology ''' m_def = Section(validate=False, a_legacy=LegacyDefinition(name='x_dl_poly_section_md_topology')) x_dl_poly_md_molecular_types = Quantity( type=np.dtype(np.int32), shape=[], description=''' Number of molecular types in topology ''', a_legacy=LegacyDefinition(name='x_dl_poly_md_molecular_types')) x_dl_poly_section_md_molecule_type = SubSection( sub_section=SectionProxy('x_dl_poly_section_md_molecule_type'), repeats=True, a_legacy=LegacyDefinition(name='x_dl_poly_section_md_molecule_type')) class section_sampling_method(public.section_sampling_method): m_def = Section(validate=False, extends_base_section=True, a_legacy=LegacyDefinition(name='section_sampling_method')) x_dl_poly_barostat_target_pressure = Quantity( type=np.dtype(np.float64), shape=[], unit='pascal', description=''' MD barostat target pressure. ''', categories=[public.settings_molecular_dynamics, public.settings_barostat, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_barostat_target_pressure')) x_dl_poly_barostat_tau = Quantity( type=np.dtype(np.float64), shape=[], unit='second', description=''' MD barostat relaxation time. ''', categories=[public.settings_molecular_dynamics, public.settings_barostat, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_barostat_tau')) x_dl_poly_integrator_dt = Quantity( type=np.dtype(np.float64), shape=[], unit='second', description=''' MD integration time step. ''', categories=[public.settings_molecular_dynamics, public.settings_integrator, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_integrator_dt')) x_dl_poly_integrator_type = Quantity( type=str, shape=[], description=''' MD integrator type, valid values are defined in the integrator_type wiki page. ''', categories=[public.settings_molecular_dynamics, public.settings_integrator, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_integrator_type')) x_dl_poly_number_of_steps_requested = Quantity( type=np.dtype(np.float64), shape=[], description=''' Number of requested MD integration time steps. ''', categories=[public.settings_molecular_dynamics, public.settings_integrator, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_number_of_steps_requested')) x_dl_poly_thermostat_target_temperature = Quantity( type=np.dtype(np.float64), shape=[], unit='kelvin', description=''' MD thermostat target temperature. ''', categories=[public.settings_molecular_dynamics, public.settings_thermostat, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_thermostat_target_temperature')) x_dl_poly_thermostat_tau = Quantity( type=np.dtype(np.float64), shape=[], unit='second', description=''' MD thermostat relaxation time. ''', categories=[public.settings_molecular_dynamics, public.settings_thermostat, public.settings_sampling], a_legacy=LegacyDefinition(name='x_dl_poly_thermostat_tau')) class section_run(public.section_run): m_def = Section(validate=False, extends_base_section=True, a_legacy=LegacyDefinition(name='section_run')) x_dl_poly_program_version_date = Quantity( type=str, shape=[], description=''' Program version date ''', a_legacy=LegacyDefinition(name='x_dl_poly_program_version_date')) x_dl_poly_system_description = Quantity( type=str, shape=[], description=''' Simulation run title ''', a_legacy=LegacyDefinition(name='x_dl_poly_system_description')) class section_system(public.section_system): m_def = Section(validate=False, extends_base_section=True, a_legacy=LegacyDefinition(name='section_system')) x_dl_poly_section_md_topology = SubSection( sub_section=SectionProxy('x_dl_poly_section_md_topology'), repeats=True, a_legacy=LegacyDefinition(name='x_dl_poly_section_md_topology')) class section_method(public.section_method): m_def = Section(validate=False, extends_base_section=True, a_legacy=LegacyDefinition(name='section_method')) x_dl_poly_step_number_equilibration = Quantity( type=np.dtype(np.int32), shape=[], description=''' MD equilibration step number ''', a_legacy=LegacyDefinition(name='x_dl_poly_step_number_equilibration')) x_dl_poly_step_number = Quantity( type=np.dtype(np.int32), shape=[], description=''' MD total step number ''', a_legacy=LegacyDefinition(name='x_dl_poly_step_number')) x_dl_poly_thermostat_temperature = Quantity( type=np.dtype(np.float64), shape=[], description=''' Thermostat coupling temperature ''', a_legacy=LegacyDefinition(name='x_dl_poly_thermostat_temperature')) m_package.__init_metainfo__()