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nomad-lab
parser-charmm
Commits
91237c43
Commit
91237c43
authored
Mar 07, 2018
by
Berk Onat
Browse files
Fixed Scala code for tests
parent
7b6b8243
Changes
1
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Inline
Side-by-side
src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala
View file @
91237c43
...
...
@@ -23,7 +23,7 @@ object CharmmParser extends SimpleExternalParserGenerator(
),
mainFileTypes
=
Seq
(
"text/.*"
),
mainFileRe
=
"""\s*Chemistry\s*at\s*HARvard\s*Macromolecular\s*Mechanics\s*"""
.
r
,
cmd
=
Seq
(
DefaultPythonInterpreter
.
pythonExe
(),
"${envDir}/parsers/
namd
/parser/parser-
namd
/CHARMMParser.py"
,
cmd
=
Seq
(
DefaultPythonInterpreter
.
pythonExe
(),
"${envDir}/parsers/
charmm
/parser/parser-
charmm
/CHARMMParser.py"
,
"${mainFilePath}"
),
resList
=
Seq
(
"parser-charmm/CHARMMParser.py"
,
...
...
@@ -35,10 +35,10 @@ object CharmmParser extends SimpleExternalParserGenerator(
"nomad_meta_info/meta_types.nomadmetainfo.json"
)
++
DefaultPythonInterpreter
.
commonFiles
(),
dirMap
=
Map
(
"parser-charmm"
->
"parsers/
namd
/parser/parser-charmm"
,
"parser-charmm"
->
"parsers/
charmm
/parser/parser-charmm"
,
"nomad_meta_info"
->
"nomad-meta-info/meta_info/nomad_meta_info"
,
"python"
->
"python-common/common/python/nomadcore"
)
++
DefaultPythonInterpreter
.
commonDirMapping
(),
metaInfoEnv
=
Some
(
lab
.
meta
.
KnownMetaInfoEnvs
.
namd
)
metaInfoEnv
=
Some
(
lab
.
meta
.
KnownMetaInfoEnvs
.
charmm
)
)
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