From 8b2bc621a208fab6f5bbeb14ea66056a5ecee7cb Mon Sep 17 00:00:00 2001 From: Markus Scheidgen <markus.scheidgen@gmail.com> Date: Fri, 13 Jul 2018 11:16:42 +0200 Subject: [PATCH] Added copyright statements and license. --- parser/parser-charmm/CHARMMCommon.py | 14 ++++++++++++++ parser/parser-charmm/CHARMMDictionary.py | 14 ++++++++++++++ parser/parser-charmm/setup_paths.py | 14 ++++++++++++++ .../eu/nomad_lab/parsers/CHARMMParser.scala | 16 ++++++++++++++++ .../eu/nomad_lab/parsers/CHARMMParserSpec.scala | 16 ++++++++++++++++ test/examples/dyntest2/parmed-test.py | 14 ++++++++++++++ 6 files changed, 88 insertions(+) diff --git a/parser/parser-charmm/CHARMMCommon.py b/parser/parser-charmm/CHARMMCommon.py index 47b8847..5161e8b 100644 --- a/parser/parser-charmm/CHARMMCommon.py +++ b/parser/parser-charmm/CHARMMCommon.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import logging import os diff --git a/parser/parser-charmm/CHARMMDictionary.py b/parser/parser-charmm/CHARMMDictionary.py index 1287e51..851d0dd 100644 --- a/parser/parser-charmm/CHARMMDictionary.py +++ b/parser/parser-charmm/CHARMMDictionary.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import setup_paths import numpy as np from CHARMMCommon import PARSERNAME, PROGRAMNAME, PARSERTAG diff --git a/parser/parser-charmm/setup_paths.py b/parser/parser-charmm/setup_paths.py index 2f0e5b3..ea06cf4 100644 --- a/parser/parser-charmm/setup_paths.py +++ b/parser/parser-charmm/setup_paths.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import sys import os import os.path diff --git a/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala b/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala index 33c0126..5ddd559 100644 --- a/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala +++ b/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala @@ -1,3 +1,19 @@ +/* + * Copyright 2018-2018 Berk Onat + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + */ + package eu.nomad_lab.parsers import eu.nomad_lab diff --git a/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala b/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala index 64cacca..1301bd6 100644 --- a/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala +++ b/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala @@ -1,3 +1,19 @@ +/* + * Copyright 2018-2018 Berk Onat + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + */ + package eu.nomad_lab.parsers import org.specs2.mutable.Specification diff --git a/test/examples/dyntest2/parmed-test.py b/test/examples/dyntest2/parmed-test.py index 0ef20d7..b84ac53 100644 --- a/test/examples/dyntest2/parmed-test.py +++ b/test/examples/dyntest2/parmed-test.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + from parmed.charmm import CharmmParameterSet import parmed as pmd import sys -- GitLab