diff --git a/parser/parser-charmm/CHARMMCommon.py b/parser/parser-charmm/CHARMMCommon.py index 47b8847fa2d6a7b57c257835c63e2b226b2edaad..5161e8b995c1b70800a10793a18b7a11fc8a60d1 100644 --- a/parser/parser-charmm/CHARMMCommon.py +++ b/parser/parser-charmm/CHARMMCommon.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import logging import os diff --git a/parser/parser-charmm/CHARMMDictionary.py b/parser/parser-charmm/CHARMMDictionary.py index 1287e51770769c64b2a77a37b901696ddf68b925..851d0ddac89786e358762f0fb64afc60c1eee56b 100644 --- a/parser/parser-charmm/CHARMMDictionary.py +++ b/parser/parser-charmm/CHARMMDictionary.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import setup_paths import numpy as np from CHARMMCommon import PARSERNAME, PROGRAMNAME, PARSERTAG diff --git a/parser/parser-charmm/setup_paths.py b/parser/parser-charmm/setup_paths.py index 2f0e5b395886a994c10438dc5ed6e2590cbc1375..ea06cf4d5c80d476807a03677f8a7b8eb45ee424 100644 --- a/parser/parser-charmm/setup_paths.py +++ b/parser/parser-charmm/setup_paths.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + import sys import os import os.path diff --git a/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala b/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala index 33c0126578adb2c167fee94b0a03319fd46936dc..5ddd5595d99fc0cc9c689f8a1e32cee34be2ff7c 100644 --- a/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala +++ b/src/main/scala/eu/nomad_lab/parsers/CHARMMParser.scala @@ -1,3 +1,19 @@ +/* + * Copyright 2018-2018 Berk Onat + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + */ + package eu.nomad_lab.parsers import eu.nomad_lab diff --git a/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala b/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala index 64cacca6cc63af5d8e2040b3b7c66ebc406a1f67..1301bd69d2cdb35f885e08456d9c790940180047 100644 --- a/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala +++ b/src/test/scala/eu/nomad_lab/parsers/CHARMMParserSpec.scala @@ -1,3 +1,19 @@ +/* + * Copyright 2018-2018 Berk Onat + * + * Licensed under the Apache License, Version 2.0 (the "License"); + * you may not use this file except in compliance with the License. + * You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, software + * distributed under the License is distributed on an "AS IS" BASIS, + * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + * See the License for the specific language governing permissions and + * limitations under the License. + */ + package eu.nomad_lab.parsers import org.specs2.mutable.Specification diff --git a/test/examples/dyntest2/parmed-test.py b/test/examples/dyntest2/parmed-test.py index 0ef20d70e6bb1826cad43d22f1ae646b1691c1e6..b84ac53f7d240ef2247e2096d03543df640bffca 100644 --- a/test/examples/dyntest2/parmed-test.py +++ b/test/examples/dyntest2/parmed-test.py @@ -1,3 +1,17 @@ +# Copyright 2018-2018 Berk Onat +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + from parmed.charmm import CharmmParameterSet import parmed as pmd import sys