diff --git a/ops/kubernetes/nomad-prod-oasis.yaml b/ops/kubernetes/nomad-prod-oasis.yaml index 670e5a4b9b8bb1597e2ed0fdb536cf49812b0d89..b8f7c7646a710e07f43560d7d7c308f798103060 100644 --- a/ops/kubernetes/nomad-prod-oasis.yaml +++ b/ops/kubernetes/nomad-prod-oasis.yaml @@ -33,6 +33,25 @@ nomad: enabled: true tools: options: + matextract: + description: "### matextract." + external_mounts: [] + file_extensions: + - ipynb + icon: logo/jupyter.svg + image: ghcr.io/blueraft/matextract-book:main-cpu + image_pull_policy: Always + default_url: /lab + maintainer: + - email: markus.scheidgen@physik.hu-berlin.de + name: Markus Scheidgen + mount_path: /home/jovyan + path_prefix: lab/tree + privileged: false + short_description: + Basic jupyter run with an empty notebook or on given notebook + file. + with_path: true jupyter: image: gitlab-registry.mpcdf.mpg.de/nomad-lab/nomad-distro/jupyter:test-oasis diff --git a/requirements.txt b/requirements.txt index fab55150beb19c00fb79e8bf441bc98d55781acc..58b9efeb51dc102098fce77d85c8e5f35377003c 100644 --- a/requirements.txt +++ b/requirements.txt @@ -197,7 +197,7 @@ nomad-analysis @ git+https://github.com/FAIRmat-NFDI/nomad-analysis@7f2fe1008495 nomad-auto-xrd @ git+https://github.com/FAIRmat-NFDI/nomad-auto-xrd@c171666849806f0c9a8290310e4365d3390dd38d # via nomad-distribution (pyproject.toml) nomad-catalysis @ git+https://github.com/FAIRmat-NFDI/nomad-catalysis-plugin@6defeec9fe925a670d978eb43ea3023a4e091496 # via nomad-distribution (pyproject.toml) nomad-dos-fingerprints==1.0.2 # via nomad-normalizer-plugin-dos -nomad-lab==1.3.12 # via bayesian-optimization-hpt, eelsdbconverter, nomad-analysis, nomad-auto-xrd, nomad-catalysis, nomad-dos-fingerprints, nomad-material-processing, nomad-measurements, nomad-normalizer-plugin-bandstructure, nomad-normalizer-plugin-dos, nomad-normalizer-plugin-simulation-workflow, nomad-normalizer-plugin-soap, nomad-normalizer-plugin-spectra, nomad-normalizer-plugin-system, nomad-parser-plugins-atomistic, nomad-parser-plugins-database, nomad-parser-plugins-electronic, nomad-parser-plugins-simulation, nomad-parser-plugins-workflow, nomad-polymerization-reactions, nomad-porous-materials, nomad-schema-plugin-run, nomad-schema-plugin-simulation-workflow, nomad-simulations, nomad-tadf-molecules, nomad-unisyscat, perovskite-solar-cell-database, transmission, nomad-distribution (pyproject.toml) +nomad-lab==1.3.13 # via bayesian-optimization-hpt, eelsdbconverter, nomad-analysis, nomad-auto-xrd, nomad-catalysis, nomad-dos-fingerprints, nomad-material-processing, nomad-measurements, nomad-normalizer-plugin-bandstructure, nomad-normalizer-plugin-dos, nomad-normalizer-plugin-simulation-workflow, nomad-normalizer-plugin-soap, nomad-normalizer-plugin-spectra, nomad-normalizer-plugin-system, nomad-parser-plugins-atomistic, nomad-parser-plugins-database, nomad-parser-plugins-electronic, nomad-parser-plugins-simulation, nomad-parser-plugins-workflow, nomad-polymerization-reactions, nomad-porous-materials, nomad-schema-plugin-run, nomad-schema-plugin-simulation-workflow, nomad-simulations, nomad-tadf-molecules, nomad-unisyscat, perovskite-solar-cell-database, transmission, nomad-distribution (pyproject.toml) nomad-material-processing @ git+https://github.com/FAIRmat-NFDI/nomad-material-processing@d8efe78e816e050caebd3fa7aa90528337db8bec # via nomad-distribution (pyproject.toml) nomad-measurements @ git+https://github.com/FAIRmat-NFDI/nomad-measurements@baa56e55fb55e7d899ff818a9ca2b8c84b724292 # via nomad-distribution (pyproject.toml) nomad-normalizer-plugin-bandstructure==1.0.2 # via nomad-distribution (pyproject.toml) @@ -275,12 +275,12 @@ pymatgen==2024.5.1 # via asr, autoxrd, nomad-lab, nomad-porous-materials, pymongo==4.6.3 # via mongoengine, nomad-lab, optimade pynxtools @ git+https://github.com/FAIRmat-NFDI/pynxtools.git@cca64f9f496c146d34e6b541695d2276c1005506 # via pynxtools-apm, pynxtools-ellips, pynxtools-em, pynxtools-mpes, pynxtools-raman, pynxtools-stm, pynxtools-xps, pynxtools-xrd, nomad-distribution (pyproject.toml) pynxtools-apm @ git+https://github.com/FAIRmat-NFDI/pynxtools-apm.git@275569746905901ab6f679407534ab6293cb1530 # via pynxtools, nomad-distribution (pyproject.toml) -pynxtools-ellips @ git+https://github.com/FAIRmat-NFDI/pynxtools-ellips.git@ded53dad7966a442cb853a1792f684bdd7c9bbfe # via pynxtools, nomad-distribution (pyproject.toml) +pynxtools-ellips @ git+https://github.com/FAIRmat-NFDI/pynxtools-ellips.git@0c0f87302404cb3abb930fa84e26c8da597b7be7 # via pynxtools, nomad-distribution (pyproject.toml) pynxtools-em @ git+https://github.com/FAIRmat-NFDI/pynxtools-em.git@7cb1a3f87f081308d51a6fbeadc30951b11320dd # via pynxtools, nomad-distribution (pyproject.toml) -pynxtools-mpes @ git+https://github.com/FAIRmat-NFDI/pynxtools-mpes.git@d88572376fef7fb88040970db22d0b6b3120431b # via pynxtools, nomad-distribution (pyproject.toml) +pynxtools-mpes @ git+https://github.com/FAIRmat-NFDI/pynxtools-mpes.git@bf491c6d8e0a6b12478f50e4a85b996b8972c69a # via pynxtools, nomad-distribution (pyproject.toml) pynxtools-raman @ git+https://github.com/FAIRmat-NFDI/pynxtools-raman.git@6fa870e437dbf413dc43f10242ae82829334bc27 # via pynxtools, nomad-distribution (pyproject.toml) -pynxtools-stm @ git+https://github.com/FAIRmat-NFDI/pynxtools-stm.git@df83f8af453e439a55886e28e91b86fd19e4d19c # via pynxtools, nomad-distribution (pyproject.toml) -pynxtools-xps @ git+https://github.com/FAIRmat-NFDI/pynxtools-xps.git@1d8c3922d8f631eb91115fa615fd22c11b9a6c14 # via pynxtools, nomad-distribution (pyproject.toml) +pynxtools-stm @ git+https://github.com/FAIRmat-NFDI/pynxtools-stm.git@da68faf2d95eb30ff987c1ef16441e529ecb404b # via pynxtools, nomad-distribution (pyproject.toml) +pynxtools-xps @ git+https://github.com/FAIRmat-NFDI/pynxtools-xps.git@8155bcbb33b457e554aadda727a3ac504dad72d4 # via pynxtools, nomad-distribution (pyproject.toml) pynxtools-xrd @ git+https://github.com/FAIRmat-NFDI/pynxtools-xrd.git@b39ef8adbf85c30dcb78b0db2cdd37651bce89e9 # via pynxtools, nomad-distribution (pyproject.toml) pyopenssl==24.2.1 # via certipy pyparsing==3.1.2 # via matplotlib, rdflib