More problems in new parsers
@ladinesa These are aims/exciting/abinit errors in the last reprocess run.
- [ ] **16**, parsers/fhi-aims, [hb5jvpgBSACVtVLJOmFhCw:rIXI0B5ryHlZ9XgBJPZRLy-Bzu5V](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/hb5jvpgBSACVtVLJOmFhCw/rIXI0B5ryHlZ9XgBJPZRLy-Bzu5V/logs)
```
TypeError: float() argument must be a string or a number, not 'list'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1535, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1236, in parse_configurations
parse_section(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1202, in parse_section
parse_scf(scf_iteration)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1051, in parse_scf
sec_eigenvalues.eigenvalues_values = eigenvalues[1]
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2141, in __set__
obj.m_set(self, value)
File "/app/nomad/metainfo/metainfo.py", line 986, in m_set
value = self.__to_np(quantity_def, value)
File "/app/nomad/metainfo/metainfo.py", line 950, in __to_np
value = value.astype(quantity_def.type)
File "/usr/local/lib/python3.7/site-packages/pint/quantity.py", line 1654, in _numpy_method_wrap
value = func(*args, **kwargs)
ValueError: setting an array element with a sequence.
```
- [ ] **11**, parsers/exciting, [kT-zz5bGQe263rp0SnrRsw:DpUeWFRyH_DW4hdzP8qc0iEJxshl](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/kT-zz5bGQe263rp0SnrRsw/DpUeWFRyH_DW4hdzP8qc0iEJxshl/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2106, in parse_configurations
sec_scc = parse_configuration(structure_optimization)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2068, in parse_configuration
sec_system = self.parse_system(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1987, in parse_system
for n in range(len(atoms)):
TypeError: object of type 'numpy.float64' has no len()
```
- [ ] **9**, parsers/exciting, [QLFt5odgS1S1LQ_MDbZgpQ:SxI6MECg2gDj1cQkqasDqrq7UXeh](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/QLFt5odgS1S1LQ_MDbZgpQ/SxI6MECg2gDj1cQkqasDqrq7UXeh/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2106, in parse_configurations
sec_scc = parse_configuration(structure_optimization)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2068, in parse_configuration
sec_system = self.parse_system(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1988, in parse_system
atom_labels.extend([species[n].split('.')[0]] * len(atoms[n]))
TypeError: object of type 'numpy.float64' has no len()
```
- [ ] **8**, parsers/abinit, [k3obHR1SQ8606OLrErgApQ:wMDaL3GXazbuzsjT4Z61mVN4c7de](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/k3obHR1SQ8606OLrErgApQ/wMDaL3GXazbuzsjT4Z61mVN4c7de/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/abinitparser/abinit_parser.py", line 985, in parse
self.parse_var()
File "/usr/local/lib/python3.7/site-packages/abinitparser/abinit_parser.py", line 943, in parse_var
if val[i] is None:
IndexError: list index out of range
```
- [ ] **5**, parsers/exciting, [ML2qGfRqSnmxDLvPKkrLMQ:mVpv7QL-IkSnnbPdZB0CxrPjhtwG](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/ML2qGfRqSnmxDLvPKkrLMQ/mVpv7QL-IkSnnbPdZB0CxrPjhtwG/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2081, in parse_configurations
sec_scc = parse_configuration(self.info_parser.get('groundstate'))
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2068, in parse_configuration
sec_system = self.parse_system(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2023, in parse_system
setattr(sec_system, name, val)
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2141, in __set__
obj.m_set(self, value)
File "/app/nomad/metainfo/metainfo.py", line 986, in m_set
value = self.__to_np(quantity_def, value)
File "/app/nomad/metainfo/metainfo.py", line 964, in __to_np
value = quantity_def.type.type(value)
ValueError: invalid literal for int() with base 10: '********'
```
- [ ] **4**, parsers/fhi-aims, [ozK5RJx9QB-sE9ZLPy7vzw:zdSDn56Iywa88cKUQceCktWwAj57](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/ozK5RJx9QB-sE9ZLPy7vzw/zdSDn56Iywa88cKUQceCktWwAj57/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1535, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1236, in parse_configurations
parse_section(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1220, in parse_section
parse_gw(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1089, in parse_gw
sec_calc_to_calc_refs = sec_run.m_create(CalculationToCalculationRefs)
File "/app/nomad/metainfo/metainfo.py", line 1129, in m_create
raise TypeError('There is no sub section to hold a %s in %s.' % (section_def, self.m_def))
TypeError: There is no sub section to hold a nomad.datamodel.metainfo.common_dft.CalculationToCalculationRefs:Section in nomad.datamodel.metainfo.common_dft.Run:Section.
```
- [ ] **4**, parsers/fhi-aims, [LZ4sNtvUT4GlbcY46Mt9Bw:wqS75Y9uIHloNTn2rmLpFVk0UblH](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/LZ4sNtvUT4GlbcY46Mt9Bw/wqS75Y9uIHloNTn2rmLpFVk0UblH/logs)
```
TypeError: float() argument must be a string or a number, not 'list'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1535, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1236, in parse_configurations
parse_section(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1176, in parse_section
sec_eigenvalues.eigenvalues_values = eigenvalues[1]
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2141, in __set__
obj.m_set(self, value)
File "/app/nomad/metainfo/metainfo.py", line 986, in m_set
value = self.__to_np(quantity_def, value)
File "/app/nomad/metainfo/metainfo.py", line 950, in __to_np
value = value.astype(quantity_def.type)
File "/usr/local/lib/python3.7/site-packages/pint/quantity.py", line 1654, in _numpy_method_wrap
value = func(*args, **kwargs)
ValueError: setting an array element with a sequence.
```
- [ ] **2**, parsers/exciting, [bBwLURrsQzyT-avIDAsNhA:Ukv9vOpmfindZocfvucn3eYOFFZq](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/bBwLURrsQzyT-avIDAsNhA/Ukv9vOpmfindZocfvucn3eYOFFZq/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2165, in parse
self.parse_gw()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1721, in parse_gw
self.parse_file(f, sec_method)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1341, in parse_file
parser_function(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1674, in _parse_input_gw
'gw/selfenergy/npol', 0)
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2251, in __set__
(value, type(value), self, self.type))
TypeError: The value 2 with type <class 'numpy.int64'> for quantity nomad.datamodel.metainfo.common_dft.Method.gw_self_energy_c_number_of_poles:Quantity is not of type <class 'int'>
```
- [ ] **2**, parsers/fhi-aims, [XUXzuLLNQKyuDGiXwTqc_A:J6HB4O_h6bimMfNfVUiJnb1wjMC2](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/XUXzuLLNQKyuDGiXwTqc_A/J6HB4O_h6bimMfNfVUiJnb1wjMC2/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1533, in parse
self.parse_method()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1266, in parse_method
species = self.control_parser.get('species')
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/app/nomad/parsing/file_parser/text_parser.py", line 513, in parse
self._parse_quantities(quantities_findall)
File "/app/nomad/parsing/file_parser/text_parser.py", line 370, in _parse_quantities
matches = re.findall(re_findall, self.file_mmap)
File "/usr/local/lib/python3.7/re.py", line 225, in findall
return _compile(pattern, flags).findall(string)
File "/usr/local/lib/python3.7/site-packages/billiard/pool.py", line 229, in soft_timeout_sighandler
raise SoftTimeLimitExceeded()
billiard.exceptions.SoftTimeLimitExceeded: SoftTimeLimitExceeded()
```
- [ ] **2**, parsers/fhi-aims, [RfpFzoO2T4mTVhblG3gTbg:o21LEcL5U4nQwacbpdqlCk_lPnFt](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/RfpFzoO2T4mTVhblG3gTbg/o21LEcL5U4nQwacbpdqlCk_lPnFt/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1514, in parse
value = self.out_parser.get(key)
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/app/nomad/parsing/file_parser/text_parser.py", line 521, in parse
self._parse_quantity(quantity)
File "/app/nomad/parsing/file_parser/text_parser.py", line 460, in _parse_quantity
value.append(sub_parser.parse())
File "/app/nomad/parsing/file_parser/text_parser.py", line 513, in parse
self._parse_quantities(quantities_findall)
File "/app/nomad/parsing/file_parser/text_parser.py", line 393, in _parse_quantities
values.append(' '.join([m.decode() for m in non_empty_match]))
File "/app/nomad/parsing/file_parser/text_parser.py", line 393, in <listcomp>
values.append(' '.join([m.decode() for m in non_empty_match]))
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x80 in position 2665: invalid start byte
```
- [ ] **2**, parsers/exciting, [sB1iGmp5Sq2U4CH2y47HRQ:CJtR-92xmAbUTF0FS09_f5sIRfeQ](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/sB1iGmp5Sq2U4CH2y47HRQ/CJtR-92xmAbUTF0FS09_f5sIRfeQ/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2081, in parse_configurations
sec_scc = parse_configuration(self.info_parser.get('groundstate'))
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2068, in parse_configuration
sec_system = self.parse_system(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1981, in parse_system
lattice_vectors *= self.input_xml_parser.get('structure/crystal/scale', 1.0)
numpy.core._exceptions.UFuncTypeError: Cannot cast ufunc 'multiply' output from dtype('float64') to dtype('int64') with casting rule 'same_kind'
```
- [ ] **1**, parsers/exciting, [CgtgzCMXTUyY0tjfBYXAnA:9UM_CpSzaystbWPZoghgjg3dZmC8](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/CgtgzCMXTUyY0tjfBYXAnA/9UM_CpSzaystbWPZoghgjg3dZmC8/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2088, in parse_configurations
self.parse_file(f, sec_scc)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1341, in parse_file
parser_function(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1106, in _parse_dos
if self.dos_parser.get('totaldos', None) is None:
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 505, in parse
if not self.total_dos:
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 471, in total_dos
self._total_dos = self.root.findall('./%s/%s' % (self._totaldos_key, self._diagram_key))
File "/app/nomad/parsing/file_parser/xml_parser.py", line 52, in root
self._file_handler = ElementTree.parse(self.mainfile).getroot()
File "/usr/local/lib/python3.7/xml/etree/ElementTree.py", line 1197, in parse
tree.parse(source, parser)
File "/usr/local/lib/python3.7/xml/etree/ElementTree.py", line 598, in parse
self._root = parser._parse_whole(source)
File "<string>", line None
xml.etree.ElementTree.ParseError: no element found: line 111468, column 0
```
- [ ] **1**, parsers/exciting, [1eMMOR07QTOUNDXy_7VlkQ:y1Vqyvq_7u35Luwr6jJRdKS29LeN](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/1eMMOR07QTOUNDXy_7VlkQ/y1Vqyvq_7u35Luwr6jJRdKS29LeN/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2167, in parse
self.parse_xs()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1653, in parse_xs
if xstype.lower() == 'bse':
AttributeError: 'NoneType' object has no attribute 'lower'
```
- [ ] **1**, parsers/exciting, [cdAK5_-gQ4GLFbZrgBRpQQ:B7YX4kB9f1PSwYbeJeUcExy-UKZw](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/cdAK5_-gQ4GLFbZrgBRpQQ/B7YX4kB9f1PSwYbeJeUcExy-UKZw/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2163, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 2088, in parse_configurations
self.parse_file(f, sec_scc)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1341, in parse_file
parser_function(section)
File "/usr/local/lib/python3.7/site-packages/excitingparser/exciting_parser.py", line 1162, in _parse_eigenvalues
if self.eigval_parser.get('eigenvalues_occupancies', None) is None:
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/app/nomad/parsing/file_parser/text_parser.py", line 498, in parse
if self.file_mmap is None:
File "/app/nomad/parsing/file_parser/text_parser.py", line 343, in file_mmap
offset=self._file_offset)
ValueError: cannot mmap an empty file
```
- [ ] **1**, parsers/fhi-aims, [RfpFzoO2T4mTVhblG3gTbg:ot1m7t1rXb7eEkIhr1felzfCNKYc](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/RfpFzoO2T4mTVhblG3gTbg/ot1m7t1rXb7eEkIhr1felzfCNKYc/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1514, in parse
value = self.out_parser.get(key)
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/app/nomad/parsing/file_parser/text_parser.py", line 513, in parse
self._parse_quantities(quantities_findall)
File "/app/nomad/parsing/file_parser/text_parser.py", line 393, in _parse_quantities
values.append(' '.join([m.decode() for m in non_empty_match]))
File "/app/nomad/parsing/file_parser/text_parser.py", line 393, in <listcomp>
values.append(' '.join([m.decode() for m in non_empty_match]))
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x80 in position 542: invalid start byte
```
- [ ] **1**, parsers/fhi-aims, [JA6KMv6XQSC2Hx4PLglCHA:PhTx-akA_BFskGrQSO-gY0lEyVLZ](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/JA6KMv6XQSC2Hx4PLglCHA/PhTx-akA_BFskGrQSO-gY0lEyVLZ/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1533, in parse
self.parse_method()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1330, in parse_method
parse_basis_set(species)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1295, in parse_basis_set
val[0], dtype=float))
ValueError: could not convert string to float: '#'
```
- [ ] **1**, parsers/fhi-aims, [jSSVtYWfTZacc7HjWPSqHQ:vzV7EoLAe3LEBffjjLLa5i_z6W-i](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/jSSVtYWfTZacc7HjWPSqHQ/vzV7EoLAe3LEBffjjLLa5i_z6W-i/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1535, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1242, in parse_configurations
parse_section(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1202, in parse_section
parse_scf(scf_iteration)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1012, in parse_scf
sec_scf = sec_scc.m_create(ScfIteration)
File "/app/nomad/metainfo/metainfo.py", line 1144, in m_create
sub_section = section_cls(**kwargs)
File "/app/nomad/metainfo/metainfo.py", line 726, in __init__
self.m_def = cls.m_def
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/usr/local/lib/python3.7/site-packages/billiard/pool.py", line 229, in soft_timeout_sighandler
raise SoftTimeLimitExceeded()
billiard.exceptions.SoftTimeLimitExceeded: SoftTimeLimitExceeded()
```
- [ ] **1**, parsers/fhi-aims, [XUXzuLLNQKyuDGiXwTqc_A:fA6FNTfenBhW5xldBbbB9J_6YC1n](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/XUXzuLLNQKyuDGiXwTqc_A/fA6FNTfenBhW5xldBbbB9J_6YC1n/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1514, in parse
value = self.out_parser.get(key)
File "/app/nomad/parsing/file_parser/file_parser.py", line 81, in get
val = self.results.get(key, None)
File "/app/nomad/parsing/file_parser/file_parser.py", line 47, in results
self.parse(self._key, **self._kwargs)
File "/app/nomad/parsing/file_parser/text_parser.py", line 521, in parse
self._parse_quantity(quantity)
File "/app/nomad/parsing/file_parser/text_parser.py", line 446, in _parse_quantity
for res in quantity.re_pattern.finditer(self.file_mmap):
File "/usr/local/lib/python3.7/site-packages/billiard/pool.py", line 229, in soft_timeout_sighandler
raise SoftTimeLimitExceeded()
billiard.exceptions.SoftTimeLimitExceeded: SoftTimeLimitExceeded()
```
- [ ] **1**, parsers/fhi-aims, [wJ7g5Tj1S5G3ooINgLvtTg:uvKF8Cgb4grSTW74NKsyseip12Ij](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/wJ7g5Tj1S5G3ooINgLvtTg/uvKF8Cgb4grSTW74NKsyseip12Ij/logs)
```
TypeError: float() argument must be a string or a number, not 'list'
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1535, in parse
self.parse_configurations()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1239, in parse_configurations
parse_section(section)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1202, in parse_section
parse_scf(scf_iteration)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1051, in parse_scf
sec_eigenvalues.eigenvalues_values = eigenvalues[1]
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2141, in __set__
obj.m_set(self, value)
File "/app/nomad/metainfo/metainfo.py", line 986, in m_set
value = self.__to_np(quantity_def, value)
File "/app/nomad/metainfo/metainfo.py", line 950, in __to_np
value = value.astype(quantity_def.type)
File "/usr/local/lib/python3.7/site-packages/pint/quantity.py", line 1654, in _numpy_method_wrap
value = func(*args, **kwargs)
ValueError: setting an array element with a sequence.
```
- [ ] **1**, parsers/fhi-aims, [N-bjfU-gQOejz93MXF-rsA:N0WJHJONigdpP527QTuMuHi50OgT](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/N-bjfU-gQOejz93MXF-rsA/N0WJHJONigdpP527QTuMuHi50OgT/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1533, in parse
self.parse_method()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1401, in parse_method
xc_parameters.setdefault('$\\omega$ in m^-1', hse_omega.to('1/m').magnitude)
AttributeError: 'float' object has no attribute 'to'
```
- [ ] **1**, parsers/fhi-aims, [EbYKP9bsRAy9faXyzpdZMA:4WICKJiugfWhFzud8Ywe7YBL9JRg](https://nomad-lab.eu/prod/rae/reprocess/gui/entry/id/EbYKP9bsRAy9faXyzpdZMA/4WICKJiugfWhFzud8Ywe7YBL9JRg/logs)
```
Traceback (most recent call last):
File "/app/nomad/processing/data.py", line 460, in parsing
self._parser_results, logger=logger)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1533, in parse
self.parse_method()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1370, in parse_method
self.parse_topology()
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1482, in parse_topology
parse_atom_type(specie)
File "/usr/local/lib/python3.7/site-packages/fhiaimsparser/fhiaims_parser.py", line 1434, in parse_atom_type
sec_atom_species.x_fhi_aims_controlInOut_species_cut_pot_scale = val[0][2]
File "/app/nomad/metainfo/metainfo.py", line 879, in __setattr__
return super().__setattr__(name, value)
File "/app/nomad/metainfo/metainfo.py", line 2141, in __set__
obj.m_set(self, value)
File "/app/nomad/metainfo/metainfo.py", line 986, in m_set
value = self.__to_np(quantity_def, value)
File "/app/nomad/metainfo/metainfo.py", line 964, in __to_np
value = quantity_def.type.type(value)
ValueError: could not convert string to float: 'Task'
```
issue