nomad-FAIR merge requestshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests2023-03-06T12:44:41Zhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1133Added coveragerc to improve python coverage report.2023-03-06T12:44:41ZMarkus ScheidgenAdded coveragerc to improve python coverage report.https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1132Fix backend test badge2023-03-06T08:48:33ZMarkus ScheidgenFix backend test badgehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1131Fixed the backend test batch to actually show the coverage.2023-03-05T12:03:05ZMarkus ScheidgenFixed the backend test batch to actually show the coverage.Changelog: FixedChangelog: Fixedhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1129Resolve "Update Code Guidelines on Docstrings in Documentation"2023-03-03T08:40:05ZMarkus ScheidgenResolve "Update Code Guidelines on Docstrings in Documentation"Closes #1369Closes #1369https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1128Fixed missing tools.json problem.2023-03-02T08:02:45ZMarkus ScheidgenFixed missing tools.json problem.The config cannot find the right default tools.json file when
run from not the project root directly. This fix is trying
to use the given file as it if, if fails uses the given file
relative to the project root.
This is related to #1353...The config cannot find the right default tools.json file when
run from not the project root directly. This fix is trying
to use the given file as it if, if fails uses the given file
relative to the project root.
This is related to #1353.
Changlog: Fixedhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1125Upgrade python version2023-03-07T08:23:58ZMarkus ScheidgenUpgrade python versionUpgraded nomad-lab to Python 3.9 and bumped a few dependency version.
Changelog: Changed
- updated to python 3.9
- only bumped what was necessary in this first step
- add a mypy.ini to remove longer and longer arg-based config from pyl...Upgraded nomad-lab to Python 3.9 and bumped a few dependency version.
Changelog: Changed
- updated to python 3.9
- only bumped what was necessary in this first step
- add a mypy.ini to remove longer and longer arg-based config from pylint calls
- some minor code fixes due to new version of mypy and pylint
With 3.9, i mean that we now build and run with 3.9. The min required is only 3.8. I guess, we could go even higher, if this is successful.https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1123Check existance of `m_proxy_value` for references.2023-02-28T13:24:51ZTheodore ChangCheck existance of `m_proxy_value` for references.Check existance of `m_proxy_value` for references as the criterion.
Use existance of `m_proxy_value` as the criterion of reference detection. Proxies will be automatically resolved which changes its type.
Changelog: Fixed
Closes #1365Check existance of `m_proxy_value` for references as the criterion.
Use existance of `m_proxy_value` as the criterion of reference detection. Proxies will be automatically resolved which changes its type.
Changelog: Fixed
Closes #1365Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1121Minor fix workflow visualizer2023-02-27T15:56:53ZAlvin Noe LadinesMinor fix workflow visualizerAlvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1119Resolve "Test JMESPath to fetch data in the GUI"2023-12-21T08:50:44ZAlvin Noe LadinesResolve "Test JMESPath to fetch data in the GUI"Closes #1325Closes #1325Alvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1118Minor workflow visualizer fix2023-02-25T20:51:20ZAlvin Noe LadinesMinor workflow visualizer fixFix link in workflow visualizerFix link in workflow visualizerAlvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1116Resolve "Tabular parser - using column and row modes together only works for ...2023-03-13T13:41:43ZAmir GolparvarResolve "Tabular parser - using column and row modes together only works for children repeated sections"The top most section that inherits from TableData enforces that all the subsequent subsections should retain the same mode of operation as the top most section. For example, when top most section is annotated with column mode, then all s...The top most section that inherits from TableData enforces that all the subsequent subsections should retain the same mode of operation as the top most section. For example, when top most section is annotated with column mode, then all sub-sections should be annotated with column mode as well. This causes some limitations when implementing a mixed mode in an ELN YAML/JSON file.
Closes #1354Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1113Workflow fix2023-02-22T20:37:23ZAlvin Noe LadinesWorkflow fixImplement various small fixes and improvements to the workflow visualizerImplement various small fixes and improvements to the workflow visualizerAlvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1109Small fixes to prepare for the production deployment.2023-03-01T06:31:36ZMarkus ScheidgenSmall fixes to prepare for the production deployment.There is still a couple of issues that need to be adressed before publishing v1.1.7 to the production deployment of nomad.
- [x] The k8s value for north.enabled is not working.
- [x] There should be error handling in the app start to de...There is still a couple of issues that need to be adressed before publishing v1.1.7 to the production deployment of nomad.
- [x] The k8s value for north.enabled is not working.
- [x] There should be error handling in the app start to deal with breaking changes in `env.js`. Otherwise, users are stuck with old implementations in the service worker.
- [x] #1095Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1101Resolve "Add Feature for Creating Workflow in ELN"2023-03-05T16:29:59ZHampus NaesstroemResolve "Add Feature for Creating Workflow in ELN"Closes #1346Closes #1346https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1099Added a config switch to enable disable north tools.2023-02-16T15:37:40ZMarkus ScheidgenAdded a config switch to enable disable north tools.This config switch will disable enable the north API
and north UI elements depending on a `north.enabled: bool`
config value. This switch is also available for the
helm chart.
Changelog: AddedThis config switch will disable enable the north API
and north UI elements depending on a `north.enabled: bool`
config value. This switch is also available for the
helm chart.
Changelog: Addedhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1096Draft: Resolve "entry is disappearing after click the save button"2023-02-21T12:26:31ZMohammad NakhaeeDraft: Resolve "entry is disappearing after click the save button"Closes #1340Closes #1340Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1095Fixes to GUI reference bugs2023-02-15T10:46:35ZMarkus ScheidgenFixes to GUI reference bugsCloses #1328Closes #1328Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1091Resolve "GUI entered information in overview is not saved"2023-02-14T20:43:10ZLauri HimanenResolve "GUI entered information in overview is not saved"Closes #1329Closes #1329https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1090Resolve "quickfix: typo in scripts/build_sdist.sh"2023-02-13T14:32:44ZAdam FeketeResolve "quickfix: typo in scripts/build_sdist.sh"Closes #1330Closes #1330Adam FeketeAdam Feketehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1087Small UX changes to the upload interface.2023-02-13T09:27:36ZMarkus ScheidgenSmall UX changes to the upload interface.Improved the file upload vs create entry button presentation.
Added documentation and supported file format links to
upload overview and uploads page.
Changelog: ChangedImproved the file upload vs create entry button presentation.
Added documentation and supported file format links to
upload overview and uploads page.
Changelog: Changed