nomad-FAIR merge requestshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests2020-06-29T13:20:58Zhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/124Encyclopedia api2020-06-29T13:20:58ZLauri HimanenEncyclopedia apiFixed a bug in encyclopedia API causing inconsistent search results, modified the /materials route to behave more like the old CoE version (=sorted results + shows total number of calculations per material).Fixed a bug in encyclopedia API causing inconsistent search results, modified the /materials route to behave more like the old CoE version (=sorted results + shows total number of calculations per material).Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/121Encyclopedia api2020-06-18T13:36:54ZLauri HimanenEncyclopedia apiContains an API that emulates the old Encyclopedia API behaviour. Also contains minor changes to the Encyclopedia metainfo layout.Contains an API that emulates the old Encyclopedia API behaviour. Also contains minor changes to the Encyclopedia metainfo layout.https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/137Encyclopedia merge2020-07-24T10:26:02ZLauri HimanenEncyclopedia mergeThis merge request will:
- Fix the list of Encyclopedia bugs in #372
- Added KeyCloak authentication and error reporting to Encyclopedia as per
#377. I cannot really test the error report sending through email, as if I
try to co...This merge request will:
- Fix the list of Encyclopedia bugs in #372
- Added KeyCloak authentication and error reporting to Encyclopedia as per
#377. I cannot really test the error report sending through email, as if I
try to configure an email server, the CI tests do not pass (CI runner is not able to connect to the email server). So once running on the cluster with correct email config, the email error reporting needs to be tested.
- Updated WIEN2k parser to a version that reports structures correctly.
- Updated MatID to the latest version with some bugfixes.
- Added the smallest test data (~3MB) and parser test for elastic that I could find in the repository.
In order for all the changes to be correctly included, full processing would
be needed. In practice, however, only the following codes are primarily
affected:
- FHIaims
- WIEN2k
- Phonopy
- CASTEP
- exciting
- QuantumEspressoMarkus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/299Encyclopedia with complex search capability.2021-04-07T10:52:32ZLauri HimanenEncyclopedia with complex search capability.Contains the updated GUI and and a few minor fixes in the API. Also contains a fix for #516.Contains the updated GUI and and a few minor fixes in the API. Also contains a fix for #516.Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/899Enlarge client_max_body_size for north2023-02-17T13:56:49ZFlorian DobenerEnlarge client_max_body_size for northFor some examples we get the error `413 Request entity too large` which is related to a client_max_body_size which is too small in the nginx reverse proxy (https://github.com/jupyterlab/jupyterlab/issues/4214).
This MR sets the client_m...For some examples we get the error `413 Request entity too large` which is related to a client_max_body_size which is too small in the nginx reverse proxy (https://github.com/jupyterlab/jupyterlab/issues/4214).
This MR sets the client_max_body_size to 500mb to resolve this issue for deployments.
I'm not sure if the config change for k8s is sufficient the way I made it, since I'm not very experienced with it.https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1680Ensure RFC3161 server is reachable2024-02-21T18:53:59ZTheodore ChangEnsure RFC3161 server is reachableTheodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/885Entry Search Dialog2022-12-02T15:33:49ZMohammad NakhaeeEntry Search DialogCloses #1020Closes #1020Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/648EnumWithSuggestions (#774)2022-05-02T07:05:14ZMohammad NakhaeeEnumWithSuggestions (#774)Complementing EnumQuantity to act as a string field with suggestionsComplementing EnumQuantity to act as a string field with suggestionsMohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/196Exciting parser2020-10-29T16:30:40ZAlvin Noe LadinesExciting parserImplementation of new exciting parser.Implementation of new exciting parser.Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/166Experimental2020-09-05T20:58:22ZMarkus ScheidgenExperimentalUpdated the experimental metadata, parsers, and gui. Added support for non NOMAD user authors and external databases. #403 #330Updated the experimental metadata, parsers, and gui. Added support for non NOMAD user authors and external databases. #403 #330https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1482Exposed upload_name in the search, added suggestions for upload_name.2023-10-03T05:34:16ZLauri HimanenExposed upload_name in the search, added suggestions for upload_name.Closes #1708Closes #1708Lauri HimanenLauri Himanenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/813Extending eln solar cell base classes2022-09-05T15:20:11ZJose Marquez PrietoExtending eln solar cell base classesAdded the missing solar cell base class `SolarCellEQE` (from #962) and fix a bug from a normalizer of the `SolarCellJVCurve` base class. @himanel1 could you look at this since you also looked at the implementation of the other classes? E...Added the missing solar cell base class `SolarCellEQE` (from #962) and fix a bug from a normalizer of the `SolarCellJVCurve` base class. @himanel1 could you look at this since you also looked at the implementation of the other classes? Extending unit tests will follow.Jose Marquez PrietoJose Marquez Prietohttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/675External references v1.1.02022-09-15T16:07:30ZAlvin Noe LadinesExternal references v1.1.0Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/1516feat: allow querying owned or shared uploads2023-10-25T10:52:19ZAhmed Ilyasfeat: allow querying owned or shared uploadsAhmed IlyasAhmed Ilyashttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/707fetch users in members dialog (#892)2022-06-10T06:09:25ZMohammad Nakhaeefetch users in members dialog (#892)Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/306Fhi vibes parser2021-04-13T08:16:01ZAlvin Noe LadinesFhi vibes parserImplemented new fhi-vibes parser.Implemented new fhi-vibes parser.Markus ScheidgenMarkus Scheidgenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/801file pagination (#858)2022-09-01T14:34:53ZMohammad Nakhaeefile pagination (#858)It handles also loading from url. The url may includes folders which are located in the next pages. If I do not find the item in the first pagination it goes to the next page until the item is found.It handles also loading from url. The url may includes folders which are located in the next pages. If I do not find the item in the first pagination it goes to the next page until the item is found.Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/746file preview (#873)2022-07-18T13:44:12ZMohammad Nakhaeefile preview (#873)Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/20Files2018-10-18T07:57:02ZMarkus ScheidgenFileshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/18Files2018-10-09T14:05:32ZMarkus ScheidgenFiles