nomad-FAIR merge requestshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests2022-08-08T07:56:32Zhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/770Resolve a set of "Solar cell ELN base classes".2022-08-08T07:56:32ZJose Marquez PrietoResolve a set of "Solar cell ELN base classes".Initial set of Solar cell base classes listed in #962. More classes will be added in the near future.Initial set of Solar cell base classes listed in #962. More classes will be added in the near future.Jose Marquez PrietoJose Marquez Prietohttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/769Draft: Added MatID as a submodule, added GUI tools for visualizing topologies...2022-08-08T11:47:47ZThea DenellDraft: Added MatID as a submodule, added GUI tools for visualizing topologies, added...Added MatID as a submodule, added GUI tools for visualizing topologies, added stub method for creating the topology.
Closes #855Added MatID as a submodule, added GUI tools for visualizing topologies, added stub method for creating the topology.
Closes #855Thea DenellThea Denellhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/766Resolve "Support names instead of indices in metainfo definition references"2022-08-16T09:08:46ZAmir GolparvarResolve "Support names instead of indices in metainfo definition references"Closes #925Closes #925Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/756Resolve "Copy function for files/mainfiles"2022-09-02T08:02:33ZAmir GolparvarResolve "Copy function for files/mainfiles"Closes #840Closes #840Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/753Resolve "Add Pandas object (datatype) support to NOMAD"2022-07-22T13:57:02ZAmir GolparvarResolve "Add Pandas object (datatype) support to NOMAD"Closes #501Closes #501Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/751Resolve "Hash based ids for metainfo definitions"2022-07-18T15:20:52ZTheodore ChangResolve "Hash based ids for metainfo definitions"Closes #843Closes #843Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/741Resolve "Hash based ids for metainfo definitions"2022-07-05T08:24:28ZTheodore ChangResolve "Hash based ids for metainfo definitions"- [x] Add endpoint: GET `/metainfo/{section_definition_id}` to download versioned packages.
- [x] Add `config.process.add_definition_id_to_reference` switch to optionally inline definition id in `m_def`.
- [x] Implement the corresponding...- [x] Add endpoint: GET `/metainfo/{section_definition_id}` to download versioned packages.
- [x] Add `config.process.add_definition_id_to_reference` switch to optionally inline definition id in `m_def`.
- [x] Implement the corresponding functionalities in context.Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/740Resolve "Migrating legacy helm 2 chart (v1) into helm 3 chart (v2)"2022-07-05T12:22:34ZAdam FeketeResolve "Migrating legacy helm 2 chart (v1) into helm 3 chart (v2)"Closes #915Closes #915https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/739Resolve "Improved support for complex structural topologies"2022-07-01T08:38:21ZMarkus ScheidgenResolve "Improved support for complex structural topologies"Closes #832Closes #832https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/733Resolve "Hash based ids for metainfo definitions"2022-07-05T08:24:28ZTheodore ChangResolve "Hash based ids for metainfo definitions"- [x] Support exporting `m_def_id` with `m_def` controlled by the `with_def_id` flag.
- [x] Support exporting `definition_id` in schemas.
- [x] Add detection of `m_def_id`, in case of mismatch, retrieve the corresponding package via `Con...- [x] Support exporting `m_def_id` with `m_def` controlled by the `with_def_id` flag.
- [x] Support exporting `definition_id` in schemas.
- [x] Add detection of `m_def_id`, in case of mismatch, retrieve the corresponding package via `Context`
- [x] Add detection of definition id in plain reference, covering both python style (`nomad.metainfo.SampleSection@1a2b3c4d`) and url style (`http://my.domain#/path/to/definition@1a2b3c4d`).Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/732Resolve "Finetuning to nomad oasis' docker-compose"2022-08-25T06:51:30ZAdam FeketeResolve "Finetuning to nomad oasis' docker-compose"Closes #930Closes #930https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/713Resolve "Quantity type url/link"2022-07-22T13:53:20ZAmir GolparvarResolve "Quantity type url/link"Closes #833Closes #833Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/708Resolve "Deploy jupyterhub using nomad helm chart"2022-06-30T13:33:14ZAdam FeketeResolve "Deploy jupyterhub using nomad helm chart"Closes #893Closes #893Adam FeketeAdam Feketehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/703Resolve "Support for inheriting sections"2022-07-07T10:23:28ZAmir GolparvarResolve "Support for inheriting sections"Closes #834Closes #834https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/700Relocate additional archives2022-06-10T06:13:56ZTheodore ChangRelocate additional archivesCloses #806Closes #806Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/699Hash based ids for metainfo definitions2022-07-05T08:24:28ZTheodore ChangHash based ids for metainfo definitionsTheodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/698Hash ID for metainfo2022-06-07T19:27:36ZTheodore ChangHash ID for metainfoTheodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/671Unify reference url handling2022-05-23T06:46:23ZTheodore ChangUnify reference url handlingCloses #806
- [x] Use the same function to handle references.
- [x] Add user authentication to client side context, add parameters to parser CLI.Closes #806
- [x] Use the same function to handle references.
- [x] Add user authentication to client side context, add parameters to parser CLI.Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/668Test for the Example Uploads part2022-05-13T06:43:03ZAmir GolparvarTest for the Example Uploads partBranch is checked out from branch 826. I made changes only to gui/src/components/uploads/UploadsPage.spec.js
Test for the ExampleUploads is added.
Closes #822Branch is checked out from branch 826. I made changes only to gui/src/components/uploads/UploadsPage.spec.js
Test for the ExampleUploads is added.
Closes #822https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/663Add entry delete buttons2022-05-10T09:55:31ZDavid SikterAdd entry delete buttonsAdds entry delete buttons as requested in #819. Entries can be removed either from the table on the upload overview page or from the entry overview page. A new endpoint was created: `uploads/{upload_id}/action/delete-entry-files`, which ...Adds entry delete buttons as requested in #819. Entries can be removed either from the table on the upload overview page or from the entry overview page. A new endpoint was created: `uploads/{upload_id}/action/delete-entry-files`, which allows the deletion of entry files based on a query (restricted to a single upload). When clicking the delete buttons, a dialog is opened, asking the user to confirm, and to specify if we should delete only the mainfiles or the mainfiles + their folders.Markus ScheidgenMarkus Scheidgen