nomad-FAIR merge requestshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests2022-01-27T13:07:56Zhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/485adding nexus parser2022-01-27T13:07:56ZSandor Brockhauseradding nexus parser- nexus metainfo and parser as a submodule from github repo
- handling submodules recursively to support nexus definitions inside nexusparser
Closes #672- nexus metainfo and parser as a submodule from github repo
- handling submodules recursively to support nexus definitions inside nexusparser
Closes #672https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/581edit quantity components (#719)2022-03-04T13:54:24ZMohammad Nakhaeeedit quantity components (#719)Modules have been splitted to separate filesModules have been splitted to separate filesMohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/582Edit Quantity Components (#740)2022-03-05T08:50:17ZMohammad NakhaeeEdit Quantity Components (#740)Origin: #719Origin: #719Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/651Resolve "Example uploads"2022-05-07T14:13:08ZAmir GolparvarResolve "Example uploads"Closes #822Closes #822Amir GolparvarAmir Golparvarhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/661Draft: Resolve "Molecular Dynamics support"2022-05-09T09:41:41ZLauri HimanenDraft: Resolve "Molecular Dynamics support"Closes #677Closes #677https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/668Test for the Example Uploads part2022-05-13T06:43:03ZAmir GolparvarTest for the Example Uploads partBranch is checked out from branch 826. I made changes only to gui/src/components/uploads/UploadsPage.spec.js
Test for the ExampleUploads is added.
Closes #822Branch is checked out from branch 826. I made changes only to gui/src/components/uploads/UploadsPage.spec.js
Test for the ExampleUploads is added.
Closes #822https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/698Hash ID for metainfo2022-06-07T19:27:36ZTheodore ChangHash ID for metainfoTheodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/699Hash based ids for metainfo definitions2022-07-05T08:24:28ZTheodore ChangHash based ids for metainfo definitionsTheodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/741Resolve "Hash based ids for metainfo definitions"2022-07-05T08:24:28ZTheodore ChangResolve "Hash based ids for metainfo definitions"- [x] Add endpoint: GET `/metainfo/{section_definition_id}` to download versioned packages.
- [x] Add `config.process.add_definition_id_to_reference` switch to optionally inline definition id in `m_def`.
- [x] Implement the corresponding...- [x] Add endpoint: GET `/metainfo/{section_definition_id}` to download versioned packages.
- [x] Add `config.process.add_definition_id_to_reference` switch to optionally inline definition id in `m_def`.
- [x] Implement the corresponding functionalities in context.Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/769Draft: Added MatID as a submodule, added GUI tools for visualizing topologies...2022-08-08T11:47:47ZThea DenellDraft: Added MatID as a submodule, added GUI tools for visualizing topologies, added...Added MatID as a submodule, added GUI tools for visualizing topologies, added stub method for creating the topology.
Closes #855Added MatID as a submodule, added GUI tools for visualizing topologies, added stub method for creating the topology.
Closes #855Thea DenellThea Denellhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/806Draft: Resolve "Add RDF/MSD plots to overview GUI page for molecular dynamics...2022-08-26T07:08:15ZLauri HimanenDraft: Resolve "Add RDF/MSD plots to overview GUI page for molecular dynamics trajectories"Closes #970Closes #970Lauri HimanenLauri Himanenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/779Resolve "Add support for identifying conventional cell from surfaces"2022-10-07T09:44:16ZThea DenellResolve "Add support for identifying conventional cell from surfaces"Closes #909Closes #909Thea DenellThea Denellhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/830Resolve "Connecting with reference databases"2022-10-07T14:29:56ZAlvin Noe LadinesResolve "Connecting with reference databases"Implement #789Implement #789Alvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/876Draft: Resolve "Standard output / Log file "duplication" for Molecular Dynami...2022-10-11T12:10:00ZJoseph RudzinskiDraft: Resolve "Standard output / Log file "duplication" for Molecular Dynamics data from Gromacs"Closes #957
issue fixed by adjusting regex mainfile command for gromacsCloses #957
issue fixed by adjusting regex mainfile command for gromacsAlvin Noe LadinesAlvin Noe Ladineshttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/906Draft: Resolve "Add MSD plot to overview page for MD"2022-10-26T07:38:07ZJoseph RudzinskiDraft: Resolve "Add MSD plot to overview page for MD"Closes #1144Closes #1144Lauri HimanenLauri Himanenhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/925Draft: Added possibility to add new widgets, started adding edit dialog valia...2022-11-04T14:04:47ZMohammad NakhaeeDraft: Added possibility to add new widgets, started adding edit dialog valiation,...Added possibility to add new widgets, started adding edit dialog valiation, fixed issue with D3 plot ids.
Related #961Added possibility to add new widgets, started adding edit dialog valiation, fixed issue with D3 plot ids.
Related #961Mohammad NakhaeeMohammad Nakhaeehttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/926Draft: ALF parser2022-11-08T12:56:37ZJose PizarroDraft: ALF parserCloses #1155Closes #1155Jose PizarroJose Pizarrohttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/902Resolve "Bi-directional metainfo references"2022-11-08T15:12:25ZTheodore ChangResolve "Bi-directional metainfo references"![RevisedCard](/uploads/ce8364890f036de0e2a49a0be13cf593/RevisedCard.mp4)![RevisedCard](/uploads/ce8364890f036de0e2a49a0be13cf593/RevisedCard.mp4)Theodore ChangTheodore Changhttps://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/947Draft: Resolve "GW metainfo and parsing for exciting and FHIaims"2022-11-14T11:01:27ZJose PizarroDraft: Resolve "GW metainfo and parsing for exciting and FHIaims"Closes #1131Closes #1131https://gitlab.mpcdf.mpg.de/nomad-lab/nomad-FAIR/-/merge_requests/861Draft: Resolve "3rd-party ELN integration"2022-11-17T08:22:09ZMarkus ScheidgenDraft: Resolve "3rd-party ELN integration"Closes #896Closes #896Markus ScheidgenMarkus Scheidgen