Commit 51bd3f2c authored by Emre Ahmetcik's avatar Emre Ahmetcik

changed paths from .../test/... to /data/...

parent 44b9d4d6
......@@ -375,7 +375,7 @@
"",
"",
" data = ForceConfs()",
" data.read_json_data(filename='/home/beaker/test/data-mlforce/Si_300K.json')",
" data.read_json_data(filename='/data/shared/tutorials/data-mlforce/Si_300K.json')",
"",
" fig = go.Figure(",
" data=[",
......@@ -456,7 +456,7 @@
"def error_vs_training(temp, train_size, test_size, gp_sigma):",
" ",
" data = ForceConfs()",
" data.read_json_data(filename='/home/beaker/test/data-mlforce/Si_{}K.json'.format(temp))",
" data.read_json_data(filename='/data/shared/tutorials/data-mlforce/Si_{}K.json'.format(temp))",
"",
" nsample = 4",
" pred_error = []",
......@@ -664,7 +664,7 @@
"def estimate_potential(train_size,temperature, gp_kernel, gp_sigma):",
" ",
" data = ForceConfs()",
" data.read_json_data(filename='/home/beaker/test/data-mlforce/Si_{}K.json'.format(temperature))",
" data.read_json_data(filename='/data/shared/tutorials/data-mlforce/Si_{}K.json'.format(temperature))",
"",
" train_confs, train_force, test_confs, test_force = data.subsampling(train_size, 0, random=True)",
"",
......@@ -769,8 +769,8 @@
" },",
" },",
" paths = {",
" \"collections\": \"~/test/periodic-table/data\",",
" \"periodic_table\": \"~/test/periodic-table\"",
" \"collections\": \"/data/shared/tutorials/periodic-table/data\",",
" \"periodic_table\": \"/data/shared/tutorials/periodic-table\"",
" };",
"",
" /**",
......
......@@ -728,7 +728,7 @@
" legend_title = 'Energy'",
"elif options['run']['config_folder'] == 'gdb':",
" data_folder = None",
" json_list = ['/home/beaker/test/nomad_sim/gdb13_7k/dsgdb7njp_ase_attributes.xyz']",
" json_list = ['/data/shared/tutorials/nomad_sim/gdb13_7k/dsgdb7njp_ase_attributes.xyz']",
" data_file_format = 'xyz'",
" frame_list = [ i for i in range(options['run']['n_blocksize']) ]",
" frame_list_idcs = [ (0,i) for i in frame_list ]",
......
......@@ -154,7 +154,7 @@
". <br>",
"You can download the code <a href=\"https://github.com/rouyang2017/SISSO\">here</a> .",
"</div>",
" Click first <b>Reference settings</b> and afterwards <b>RUN</b> to reproduce the results of the following paper:",
" Click <b>RUN</b> to reproduce the results of the following paper:",
"<div style=\"padding: 1ex; margin-top: 1ex; margin-bottom: 1ex; border-style: dotted; border-width: 1pt; border-color: blue; border-radius: 3px;\">",
"C. M. Acosta, R. Ouyang, A. Fazzio, M. Scheffler, L. M. Ghiringhelli, C. Carbogno <span style=\"font-style: italic;\">Analysis of Topological Transitions in Two-dimensional Materials by Compressed Sensing, </span> <a href=\"https://arxiv.org/abs/1710.03319\">https://arxiv.org/abs/1805.10950</a> (2018).",
"</div>",
......
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