diff --git a/beaker-notebooks/sis_cscl.bkr b/beaker-notebooks/sis_cscl.bkr index aee331ce62c14709235b1a2db471c3cb01a2ca38..063b54160f505a94144a97c54921d8bc2dd2e448 100644 --- a/beaker-notebooks/sis_cscl.bkr +++ b/beaker-notebooks/sis_cscl.bkr @@ -70,7 +70,7 @@ }, "selectedType": "BeakerDisplay", "elapsedTime": 0, - "height": 490 + "height": 418 }, "evaluatorReader": true, "lineCount": 19 @@ -822,14 +822,21 @@ "except:", " PORT = 22", " ", + "#rsa key for mpi container", + "key_file = '/home/beaker/key.mpi'", + "key = \"-----BEGIN RSA PRIVATE KEY-----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\\nyrXaOEY83tm6x/fny5ZaZmk8lNth7bfWywuTMkZLX3fYpWtIeE4=\\n-----END RSA PRIVATE KEY-----\"", "", + "d = open(key_file,'w')", + "d.write(key)", + "d.close()", + " ", + "### Settings", + "#1) Local paths", "Local_paths = {", " 'local_path' : '/home/beaker/',", " 'SIS_input_folder_name' : random_name,", "}", "", - "", - "", "#2) for ssh connection", "Remote_run = {", " 'mpi_command':'',", @@ -838,7 +845,7 @@ " 'hostname' : IP,", " 'port' : PORT,", " 'username' : 'tutorial',", - " 'key_file' : '/home/beaker/docker.openmpi/ssh/id_rsa.mpi'", + " 'key_file' : key_file", "}", "", "#3) SIS parameters", @@ -869,7 +876,7 @@ "height": 287 }, "evaluatorReader": true, - "lineCount": 50, + "lineCount": 57, "tags": "calc_cell" }, {