Commit 1e70bd49 authored by Georgi Tushev's avatar Georgi Tushev
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add counts

parent 947eaf12
ERCC 2and3Hc2_R1.MACE.cleaned 2and3Hc3_R1.MACE.cleaned 4and5Hc2_R1.MACE.cleaned 4and5Hc3_R1.MACE.cleaned 6and7Hc2_R1.MACE.cleaned 6and7Hc3_R1.MACE.cleaned 80SHc2_R1.MACE.cleaned 80SHc3_R1.MACE.cleaned InputHc2_R1.MACE.cleaned InputHc3_R1.MACE.cleaned bigger7Hc2_R1.MACE.cleaned bigger7Hc3_R1.MACE.cleaned
ERCC-00002 9140 12382 15199 9748 11895 9531 3575 6079 31329 26857 26377 9934
ERCC-00003 382 456 632 280 374 300 106 152 1438 1280 957 233
ERCC-00004 3920 4865 6757 3681 4579 3910 1274 1961 13739 11403 11893 3558
ERCC-00009 346 439 551 392 464 401 143 220 1193 992 1055 374
ERCC-00012 7 16 21 24 24 7 3 1 5 9 17 8
ERCC-00013 6 2 3 4 5 2 0 2 2 5 4 3
ERCC-00014 1 0 1 1 2 2 0 1 2 4 0 4
ERCC-00016 0 2 0 2 3 0 0 0 1 2 0 0
ERCC-00017 9 9 7 19 8 6 1 4 5 2 6 3
ERCC-00019 27 29 43 23 43 43 10 14 73 51 48 28
ERCC-00022 114 148 170 111 127 100 35 70 345 284 372 150
ERCC-00024 6 4 4 1 2 4 2 4 4 5 9 1
ERCC-00025 28 40 44 37 35 20 11 20 83 77 109 31
ERCC-00028 4 7 3 6 6 0 2 4 8 7 6 3
ERCC-00031 0 0 0 1 0 0 0 0 3 1 2 0
ERCC-00033 1 1 0 1 0 0 2 0 5 2 4 0
ERCC-00034 21 22 22 16 15 12 13 14 37 19 19 3
ERCC-00035 39 51 63 39 54 51 8 23 134 102 119 41
ERCC-00039 4 2 3 1 0 0 0 1 4 6 4 3
ERCC-00040 3 5 3 1 5 3 0 0 1 2 4 4
ERCC-00042 256 349 443 261 314 242 94 137 880 806 881 280
ERCC-00043 193 238 305 118 141 105 36 74 767 632 335 86
ERCC-00044 57 72 88 48 65 60 21 27 178 152 166 44
ERCC-00046 2446 2708 4260 1997 2564 2193 772 1024 9161 7814 7827 1669
ERCC-00048 3 4 4 1 10 10 1 2 4 0 13 1
ERCC-00051 17 17 34 11 18 18 5 6 77 51 63 18
ERCC-00053 13 12 33 13 9 9 2 5 55 57 28 10
ERCC-00054 10 16 16 18 12 14 1 10 31 31 47 22
ERCC-00058 2 4 2 3 3 4 1 0 8 4 3 3
ERCC-00059 3 10 20 7 7 3 3 6 31 25 34 14
ERCC-00060 167 238 328 163 181 152 63 80 677 534 560 134
ERCC-00062 43 55 81 41 53 29 11 11 161 161 77 31
ERCC-00067 3 0 4 4 4 4 2 2 6 9 3 1
ERCC-00069 5 7 5 3 3 2 1 2 2 1 7 4
ERCC-00071 41 56 71 37 53 31 15 31 129 105 100 35
ERCC-00073 0 0 3 0 2 0 0 2 2 2 2 1
ERCC-00074 13302 15432 24005 12680 15608 13132 4567 6799 47394 40293 46083 13560
ERCC-00075 0 3 1 2 2 2 0 1 1 1 3 0
ERCC-00076 100 138 170 137 178 107 36 66 389 324 387 115
ERCC-00077 5 11 14 3 5 5 1 4 13 9 14 3
ERCC-00078 11 25 14 14 18 16 5 8 43 35 37 14
ERCC-00079 25 41 45 33 34 30 14 27 102 86 113 42
ERCC-00081 0 1 0 1 1 4 1 0 0 1 1 0
ERCC-00083 0 3 6 3 6 2 0 0 3 1 4 3
ERCC-00084 8 6 8 9 2 4 3 7 36 19 17 4
ERCC-00085 3 3 1 1 5 3 0 0 5 8 7 1
ERCC-00086 3 9 7 6 7 11 0 2 2 1 8 6
ERCC-00092 123 156 199 105 172 104 48 59 429 315 396 114
ERCC-00095 115 129 191 121 135 106 41 57 395 346 386 121
ERCC-00096 8959 11803 15590 9175 11673 8868 3300 5513 30355 25374 31219 9966
ERCC-00097 1 0 0 0 0 1 1 2 2 1 1 3
ERCC-00098 11 17 17 15 7 13 2 2 6 14 11 3
ERCC-00099 10 9 17 4 13 5 5 5 35 25 18 4
ERCC-00104 0 0 0 1 0 0 0 0 0 0 0 1
ERCC-00108 511 780 812 551 669 501 202 363 1963 1501 1428 505
ERCC-00109 3 3 2 2 2 2 1 1 1 2 1 0
ERCC-00111 297 403 492 296 382 282 121 186 896 869 1029 353
ERCC-00112 57 68 107 56 68 38 15 35 207 153 179 54
ERCC-00113 2496 3218 3985 2596 3193 2313 931 1446 8142 6925 8185 2572
ERCC-00116 117 170 219 94 159 122 42 83 409 300 328 144
ERCC-00117 1 1 2 1 0 1 0 0 0 1 2 1
ERCC-00120 0 0 2 1 1 1 0 1 4 1 1 0
ERCC-00123 2 0 3 2 2 4 0 0 0 0 3 0
ERCC-00126 2 3 1 3 1 0 0 0 11 10 1 1
ERCC-00130 12438 16141 20738 12749 15525 12259 4117 7210 43780 37279 43489 13366
ERCC-00131 53 100 114 66 74 89 20 35 200 157 195 76
ERCC-00134 0 1 0 1 1 0 0 0 0 1 2 1
ERCC-00136 825 999 1432 731 943 731 195 375 2530 2392 2346 726
ERCC-00137 24 10 23 27 15 17 5 11 17 13 20 19
ERCC-00138 9 10 26 26 11 8 5 3 11 13 18 11
ERCC-00142 0 0 4 2 3 1 0 0 1 1 3 0
ERCC-00143 4 6 8 7 5 5 2 0 4 5 8 4
ERCC-00144 18 36 26 22 18 17 3 14 66 50 53 19
ERCC-00145 252 378 392 227 289 220 94 147 865 814 602 224
ERCC-00147 0 0 1 0 0 0 0 0 2 2 1 0
ERCC-00148 11 15 25 24 24 18 2 7 28 23 39 16
ERCC-00150 4 8 7 2 5 4 1 2 5 6 10 1
ERCC-00154 4 8 4 5 4 2 6 3 7 13 10 4
ERCC-00156 0 1 0 0 0 0 0 0 1 0 0 0
ERCC-00157 4 3 4 2 7 6 0 0 5 15 12 3
ERCC-00158 1 2 1 3 4 2 1 1 1 1 3 2
ERCC-00160 5 8 8 4 3 9 1 4 12 11 18 5
ERCC-00162 45 58 83 45 49 40 20 17 132 137 144 44
ERCC-00163 13 10 21 19 22 15 4 7 45 28 41 11
ERCC-00164 0 0 0 3 2 2 0 0 1 1 2 0
ERCC-00165 51 38 76 50 60 39 16 19 103 83 128 55
ERCC-00168 0 0 0 1 0 0 0 0 0 0 0 0
ERCC-00170 5 6 4 5 7 2 1 2 11 12 10 5
ERCC-00171 1694 2194 2885 1982 2383 1843 665 1154 5678 4801 6049 2041
sample reads.raw reads.aligned reads.ercc reads.mito ratio.aligned ratio.ercc ratio.mito
2and3Hc2_R1.MACE.cleaned 6502897 5124752 58939 53339 78.807215 0.906350 0.820234
2and3Hc3_R1.MACE.cleaned 7693990 6060973 74730 50336 78.775421 0.971278 0.654225
4and5Hc2_R1.MACE.cleaned 9086127 7244897 101015 34267 79.735810 1.111750 0.377135
4and5Hc3_R1.MACE.cleaned 5901348 4706567 59028 14532 79.754100 1.000246 0.246249
6and7Hc2_R1.MACE.cleaned 4771834 3862606 72877 12133 80.945942 1.527233 0.254263
6and7Hc3_R1.MACE.cleaned 4655716 3758648 58274 8124 80.731900 1.251666 0.174495
80SHc2_R1.MACE.cleaned 1163641 822494 20707 41857 70.682796 1.779501 3.597072
80SHc3_R1.MACE.cleaned 1629758 1101244 33667 53700 67.571014 2.065767 3.294968
InputHc2_R1.MACE.cleaned 5831777 4305878 204928 101238 73.834751 3.513989 1.735972
InputHc3_R1.MACE.cleaned 4824334 3422604 173967 55973 70.944590 3.606031 1.160222
bigger7Hc2_R1.MACE.cleaned 10560307 8716563 194216 19836 82.540811 1.839113 0.187835
bigger7Hc3_R1.MACE.cleaned 3646327 2993304 60957 6142 82.090937 1.671737 0.168443
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