Commits · master · Lucas Miranda / deepOF

18 May, 2022 2 commits
- Added improvements to unsupervised preprocessing. Updated soft_counts on VQVAE... · a064259b
  Lucas Miranda authored May 19, 2022
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Added improvements to unsupervised preprocessing. Updated soft_counts on VQVAE models to follow the fuzzy C-means algorithm
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  a064259b
- Added improvements to unsupervised preprocessing. Updated soft_counts on VQVAE... · 3397ff24
  Lucas Miranda authored May 18, 2022
```
Added improvements to unsupervised preprocessing. Updated soft_counts on VQVAE models to follow the fuzzy C-means algorithm
```
  3397ff24
15 May, 2022 1 commit
- fixed bugs on trajectory alignment and centering · 505f59b3
  Lucas Miranda authored May 15, 2022
  
  505f59b3
20 Apr, 2022 1 commit
- Started implementing deepof.analyze. · d857c763
  Lucas Miranda authored Apr 20, 2022
  
  d857c763
19 Apr, 2022 3 commits
- Started implementing deepof.analyze. Refactored VQVAE models · a5b4a675
  Lucas Miranda authored Apr 20, 2022
  
  a5b4a675
- Started implementing deepof.analyze. Refactored VQVAE models · 6caddc15
  Lucas Miranda authored Apr 20, 2022
  
  6caddc15
- Updated notebooks · f3219a55
  Lucas Miranda authored Apr 19, 2022
  
  f3219a55
11 Apr, 2022 1 commit
- Added ellipsis visualization when manually delimiting the arena · c1dafc11
  Lucas Miranda authored Apr 11, 2022
  
  c1dafc11
10 Apr, 2022 6 commits
- Added ellipsis visualization when manually delimiting the arena · a9df09c8
  Lucas Miranda authored Apr 10, 2022
  
  a9df09c8
- Added ellipsis visualization when manually delimiting the arena · a55949b7
  Lucas Miranda authored Apr 10, 2022
  
  a55949b7
- Added ellipsis visualization when manually delimiting the arena · c00d5ac0
  Lucas Miranda authored Apr 10, 2022
  
  c00d5ac0
- Added ellipsis visualization when manually delimiting the arena · 0669d5f6
  Lucas Miranda authored Apr 10, 2022
  
  0669d5f6
- Added ellipsis visualization when manually delimiting the arena · 7c6a2e19
  Lucas Miranda authored Apr 10, 2022
  
  7c6a2e19
- Added ellipsis visualization when manually delimiting the arena · c836ad65
  Lucas Miranda authored Apr 10, 2022
  
  c836ad65
04 Apr, 2022 1 commit
- Refactored dependency structure. Added circular-manual to the list of arena detection options · b1de310e
  Lucas Miranda authored Apr 04, 2022
  
  b1de310e
02 Apr, 2022 1 commit

Fixed bug in burst detection, which crashed if no activity for a certain label... · b42ba55d

Lucas Miranda authored Apr 02, 2022

Fixed bug in burst detection, which crashed if no activity for a certain label was detected. Added polygonal arena detection with a manual GUI. Climbing-detection logic for this case remains to be implemented

b42ba55d

31 Mar, 2022 3 commits
- Added burst detection to supervised pipeline · 02e08b14
  Lucas Miranda authored Mar 31, 2022
  
  02e08b14
- Updated activation in residual connection · a0165967
  Lucas Miranda authored Mar 31, 2022
  
  a0165967
- Updated activation in residual connection · 08be4483
  Lucas Miranda authored Mar 31, 2022
  
  08be4483
21 Mar, 2022 2 commits
- Updated activation in residual connection · a9ca8584
  Lucas Miranda authored Mar 21, 2022
  
  a9ca8584
- Updated activation in residual connection · e6f11e1f
  Lucas Miranda authored Mar 21, 2022
  
  e6f11e1f
20 Mar, 2022 9 commits
- Updated activation in residual connection · 0d080675
  Lucas Miranda authored Mar 20, 2022
  
  0d080675
- Updated activation in residual connection · 17b7ff79
  Lucas Miranda authored Mar 20, 2022
  
  17b7ff79
- Update data.py · 0174319d
  Lucas Miranda authored Mar 20, 2022
  
  0174319d
- Added phenotype prediction optional classifier to VQVAE models · e60d6801
  Lucas Miranda authored Mar 20, 2022
  
  e60d6801
- Added phenotype prediction optional classifier to VQVAE models · c2099065
  Lucas Miranda authored Mar 20, 2022
  
  c2099065
- Added phenotype prediction optional classifier to VQVAE models · 617bbec0
  Lucas Miranda authored Mar 20, 2022
  
  617bbec0
- Added phenotype prediction optional classifier to VQVAE models · 37792a13
  Lucas Miranda authored Mar 20, 2022
  
  37792a13
- Added phenotype prediction optional classifier to VQVAE models · 629ae36f
  Lucas Miranda authored Mar 20, 2022
  
  629ae36f
- Added phenotype prediction optional classifier to VQVAE models · c8305b35
  Lucas Miranda authored Mar 20, 2022
  
  c8305b35
19 Mar, 2022 1 commit
- Fixed bugs on data preprocessing when changepoint detection was turned off · 545e7502
  Lucas Miranda authored Mar 19, 2022
  
  545e7502
18 Mar, 2022 2 commits
- Fixed bugs on data preprocessing when changepoint detection was turned off · b28ddb42
  Lucas Miranda authored Mar 18, 2022
  
  b28ddb42
- Fixed bugs on data preprocessing when changepoint detection was turned off · 1584f087
  Lucas Miranda authored Mar 18, 2022
  
  1584f087
15 Mar, 2022 6 commits
- Updated VQVAE hyperparameter logging · 01105def
  Lucas Miranda authored Mar 15, 2022
  
  01105def
- Updated VQVAE hyperparameter logging · c01a3d65
  Lucas Miranda authored Mar 15, 2022
  
  c01a3d65
- Updated VQVAE hyperparameter logging · 5ec30570
  Lucas Miranda authored Mar 15, 2022
  
  5ec30570
- Updated VQVAE hyperparameter logging · d8ea2cae
  Lucas Miranda authored Mar 15, 2022
  
  d8ea2cae
- Updated VQVAE hyperparameter logging · 8e69dbbf
  Lucas Miranda authored Mar 15, 2022
  
  8e69dbbf
- Updated VQVAE hyperparameter logging · 7ba29610
  Lucas Miranda authored Mar 15, 2022
  
  7ba29610
14 Mar, 2022 1 commit
- Updated documentation · 45df95b7
  Lucas Miranda authored Mar 14, 2022
  
  45df95b7