From e0c11bde8d2dc2c426cee89e27edbcd102e37ed6 Mon Sep 17 00:00:00 2001
From: Lucas Miranda <lucas_miranda@psych.mpg.de>
Date: Thu, 3 Dec 2020 15:44:35 +0100
Subject: [PATCH] Reformatted file
---
deepof_experiments.smk | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/deepof_experiments.smk b/deepof_experiments.smk
index 5daeda16..db2c272f 100644
--- a/deepof_experiments.smk
+++ b/deepof_experiments.smk
@@ -22,7 +22,7 @@ rule deepof_experiments:
input:
expand(
"/u/lucasmir/DLC/DLC_autoencoders/DeepOF/deepof/logs/dimension_and_loss_experiments/trained_weights/\
- GMVAE_loss={loss}_encoding={encs}_final_weights.h5",
+ GMVAE_loss={loss}_encoding={encs}_final_weights.h5",
loss=losses,
encs=encodings,
),
@@ -38,10 +38,10 @@ rule explore_encoding_dimension_and_loss_function:
),
shell:
"pipenv run python -m deepof.train_model --train-path {input.data_path} --val-num 10 --components 10 \
- --input-type coords --predictor 0 --variational True --loss {wildcards.loss} --kl-warmup 20 --mmd-warmup 20 \
- --encoding-size {wildcards.encs} --batch-size 256 --window-size 11 --window-step 11 --exclude-bodyparts \
- Tail_base,Tail_1,Tail_2,Tail_tip,Spine_2 --stability-check 3 --out-path \
- {}dimension_and_loss_experiments/trained_weights".format(
+ --input-type coords --predictor 0 --variational True --loss {wildcards.loss} --kl-warmup 20 --mmd-warmup 20 \
+ --encoding-size {wildcards.encs} --batch-size 256 --window-size 11 --window-step 11 --exclude-bodyparts \
+ Tail_base,Tail_1,Tail_2,Tail_tip,Spine_2 --stability-check 3 --out-path \
+ {}dimension_and_loss_experiments/trained_weights".format(
outpath
)
--
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