From e0c11bde8d2dc2c426cee89e27edbcd102e37ed6 Mon Sep 17 00:00:00 2001 From: Lucas Miranda <lucas_miranda@psych.mpg.de> Date: Thu, 3 Dec 2020 15:44:35 +0100 Subject: [PATCH] Reformatted file --- deepof_experiments.smk | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/deepof_experiments.smk b/deepof_experiments.smk index 5daeda16..db2c272f 100644 --- a/deepof_experiments.smk +++ b/deepof_experiments.smk @@ -22,7 +22,7 @@ rule deepof_experiments: input: expand( "/u/lucasmir/DLC/DLC_autoencoders/DeepOF/deepof/logs/dimension_and_loss_experiments/trained_weights/\ - GMVAE_loss={loss}_encoding={encs}_final_weights.h5", + GMVAE_loss={loss}_encoding={encs}_final_weights.h5", loss=losses, encs=encodings, ), @@ -38,10 +38,10 @@ rule explore_encoding_dimension_and_loss_function: ), shell: "pipenv run python -m deepof.train_model --train-path {input.data_path} --val-num 10 --components 10 \ - --input-type coords --predictor 0 --variational True --loss {wildcards.loss} --kl-warmup 20 --mmd-warmup 20 \ - --encoding-size {wildcards.encs} --batch-size 256 --window-size 11 --window-step 11 --exclude-bodyparts \ - Tail_base,Tail_1,Tail_2,Tail_tip,Spine_2 --stability-check 3 --out-path \ - {}dimension_and_loss_experiments/trained_weights".format( + --input-type coords --predictor 0 --variational True --loss {wildcards.loss} --kl-warmup 20 --mmd-warmup 20 \ + --encoding-size {wildcards.encs} --batch-size 256 --window-size 11 --window-step 11 --exclude-bodyparts \ + Tail_base,Tail_1,Tail_2,Tail_tip,Spine_2 --stability-check 3 --out-path \ + {}dimension_and_loss_experiments/trained_weights".format( outpath ) -- GitLab