diff --git a/deepof_experiments.smk b/deepof_experiments.smk index 8d071c387b6966534d28366bc895cdefc1862b6c..bf36d99f8970d330032619154b5c7a37177b2535 100644 --- a/deepof_experiments.smk +++ b/deepof_experiments.smk @@ -55,14 +55,14 @@ rule deepof_experiments: rule elliptical_arena_detector: input: - to_exec="supplementary_notebooks/regognise_elliptical_arena_blank.ipynb", + to_exec="/psycl/g/mpsstatgen/lucas/DLC/DLC_autoencoders/DeepOF/deepof/supplementary_notebooks/regognise_elliptical_arena_blank.ipynb", output: - exec="supplementary_notebooks/regognise_elliptical_arena.ipynb", + exec="/psycl/g/mpsstatgen/lucas/DLC/DLC_autoencoders/DeepOF/deepof/supplementary_notebooks/regognise_elliptical_arena.ipynb", shell: "papermill {input.to_exec} " - "-p vid_path './supplementary_notebooks' " - "-p log_path ./logs' " - "-p out_path './logs' " + "-p vid_path './supplementary_notebooks/' " + "-p log_path ./logs/' " + "-p out_path './trained_models/' " "{output.exec}"