diff --git a/deepof_experiments.smk b/deepof_experiments.smk index 99ce16b8d50327e1bbff054ad579c8cc0dd5cc75..7ae069697587042dd98fa293189ae058ef52a2d0 100644 --- a/deepof_experiments.smk +++ b/deepof_experiments.smk @@ -68,7 +68,7 @@ rule explore_encoding_dimension_and_loss_function: shell: "pipenv run python -m deepof.train_model " "--train-path {input.data_path} " - "--val-num 10 " + "--val-num 25 " "--components {wildcards.k} " "--input-type coords " "--predictor 0 " @@ -83,17 +83,3 @@ rule explore_encoding_dimension_and_loss_function: "--exclude-bodyparts Tail_base,Tail_1,Tail_2,Tail_tip,Spine_2 " "--stability-check 3 " "--output-path {outpath}dimension_and_loss_experiments" - - -# rule explore_number_of_components: -# input: -# output: -# shell: -# rule explore_phenotype_prediction: -# input: -# output: -# shell: -# rule explore_predictor_branch: -# input: -# output: -# shell: