From f6702c41579b0b7d3e93ed00b1f0c80f32e62888 Mon Sep 17 00:00:00 2001
From: Martin Reinecke <martin@mpa-garching.mpg.de>
Date: Sun, 18 Mar 2018 12:29:19 +0100
Subject: [PATCH] move citations into documentation and link from README.md

---
 README.md                 | 62 +++++++--------------------------------
 docs/source/citations.rst | 44 +++++++++++++++++++++++++++
 docs/source/index.rst     |  1 +
 3 files changed, 55 insertions(+), 52 deletions(-)
 create mode 100644 docs/source/citations.rst

diff --git a/README.md b/README.md
index 7cd87b4fa..be1939f7d 100644
--- a/README.md
+++ b/README.md
@@ -4,7 +4,7 @@ NIFTy - Numerical Information Field Theory
 [![coverage report](https://gitlab.mpcdf.mpg.de/ift/NIFTy/badges/NIFTy_4/coverage.svg)](https://gitlab.mpcdf.mpg.de/ift/NIFTy/commits/NIFTy_4)
 
 **NIFTy** project homepage:
-[http://ift.pages.mpcdf.de/NIFTy](http://ift.pages.mpcdf.de/NIFTy)
+[https://ift.pages.mpcdf.de/NIFTy](https://ift.pages.mpcdf.de/NIFTy)
 
 Summary
 -------
@@ -110,66 +110,24 @@ following command in the repository root:
 ### First Steps
 
 For a quick start, you can browse through the [informal
-introduction](http://ift.pages.mpcdf.de/NIFTy/code.html) or
+introduction](https://ift.pages.mpcdf.de/NIFTy/code.html) or
 dive into NIFTy by running one of the demonstrations, e.g.:
 
     python demos/wiener_filter_via_curvature.py
 
-Acknowledgement
----------------
+
+### Acknowledgement
 
 Please acknowledge the use of NIFTy in your publication(s) by using a
 phrase such as the following:
 
 > *"Some of the results in this publication have been derived using the
-> NIFTy package [Steininger et al., 2017]."[1]
-
-Or one of the following BibTeX entries:
-
-    @software{nifty,
-      author = {{Martin Reinecke, Theo Steininger, Marco Selig}},
-      title = {NIFTy -- Numerical Information Field TheorY},
-      url = {https://gitlab.mpcdf.mpg.de/ift/NIFTy},
-      version = {nifty4},
-      date = {2018-04-05},
-    }
-    
-    @ARTICLE{2013A&A...554A..26S,
-      author = {{Selig}, M. and {Bell}, M.~R. and {Junklewitz}, H. and {Oppermann}, N. and {Reinecke}, M. and {Greiner}, M. and {Pachajoa}, C. and {En{\ss}lin}, T.~A.},
-      title = "{NIFTY - Numerical Information Field Theory. A versatile PYTHON library for signal inference}",
-      journal = {\aap},
-      archivePrefix = "arXiv",
-      eprint = {1301.4499},
-      primaryClass = "astro-ph.IM",
-      keywords = {methods: data analysis, methods: numerical, methods: statistical, techniques: image processing},
-      year = 2013,
-      month = jun,
-      volume = 554,
-      eid = {A26},
-      pages = {A26},
-      doi = {10.1051/0004-6361/201321236},
-      adsurl = {http://cdsads.u-strasbg.fr/abs/2013A%26A...554A..26S},
-      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
-    }
-    
-    @ARTICLE{2017arXiv170801073S,
-      author = {{Steininger}, T. and {Dixit}, J. and {Frank}, P. and {Greiner}, M. and {Hutschenreuter}, S. and {Knollm{\"u}ller}, J. and {Leike}, R. and {Porqueres}, N. and {Pumpe}, D. and {Reinecke}, M. and {{\v S}raml}, M. and {Varady}, C. and {En{\ss}lin}, T.},
-      title = "{NIFTy 3 - Numerical Information Field Theory - A Python framework for multicomponent signal inference on HPC clusters}",
-      journal = {ArXiv e-prints},
-      archivePrefix = "arXiv",
-      eprint = {1708.01073},
-      primaryClass = "astro-ph.IM",
-      keywords = {Astrophysics - Instrumentation and Methods for Astrophysics},
-      year = 2017,
-      month = aug,
-      adsurl = {http://cdsads.u-strasbg.fr/abs/2017arXiv170801073S},
-      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
-    }
-
-### References
-
-Release Notes
--------------
+> NIFTy package [(https://gitlab.mpcdf.mpg.de/ift/NIFTy)](https://gitlab.mpcdf.mpg.de/ift/NIFTy)"
+
+and a citation to one of the [publications](https://ift.pages.mpcdf.de/NIFTy/citations.html)
+
+
+### Release Notes
 
 The NIFTy package is licensed under the terms of the
 [GPLv3](https://www.gnu.org/licenses/gpl.html) and is distributed
diff --git a/docs/source/citations.rst b/docs/source/citations.rst
new file mode 100644
index 000000000..7767e6a8e
--- /dev/null
+++ b/docs/source/citations.rst
@@ -0,0 +1,44 @@
+NIFTy-related publications
+==========================
+
+::
+
+    @software{nifty,
+      author = {{Martin Reinecke, Theo Steininger, Marco Selig}},
+      title = {NIFTy -- Numerical Information Field TheorY},
+      url = {https://gitlab.mpcdf.mpg.de/ift/NIFTy},
+      version = {nifty4},
+      date = {2018-04-05},
+    }
+
+    @ARTICLE{2013A&A...554A..26S,
+      author = {{Selig}, M. and {Bell}, M.~R. and {Junklewitz}, H. and {Oppermann}, N. and {Reinecke}, M. and {Greiner}, M. and {Pachajoa}, C. and {En{\ss}lin}, T.~A.},
+      title = "{NIFTY - Numerical Information Field Theory. A versatile PYTHON library for signal inference}",
+      journal = {\aap},
+      archivePrefix = "arXiv",
+      eprint = {1301.4499},
+      primaryClass = "astro-ph.IM",
+      keywords = {methods: data analysis, methods: numerical, methods: statistical, techniques: image processing},
+      year = 2013,
+      month = jun,
+      volume = 554,
+      eid = {A26},
+      pages = {A26},
+      doi = {10.1051/0004-6361/201321236},
+      adsurl = {http://cdsads.u-strasbg.fr/abs/2013A%26A...554A..26S},
+      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+    }
+
+    @ARTICLE{2017arXiv170801073S,
+      author = {{Steininger}, T. and {Dixit}, J. and {Frank}, P. and {Greiner}, M. and {Hutschenreuter}, S. and {Knollm{\"u}ller}, J. and {Leike}, R. and {Porqueres}, N. and {Pumpe}, D. and {Reinecke}, M. and {{\v S}raml}, M. and {Varady}, C. and {En{\ss}lin}, T.},
+      title = "{NIFTy 3 - Numerical Information Field Theory - A Python framework for multicomponent signal inference on HPC clusters}",
+      journal = {ArXiv e-prints},
+      archivePrefix = "arXiv",
+      eprint = {1708.01073},
+      primaryClass = "astro-ph.IM",
+      keywords = {Astrophysics - Instrumentation and Methods for Astrophysics},
+      year = 2017,
+      month = aug,
+      adsurl = {http://cdsads.u-strasbg.fr/abs/2017arXiv170801073S},
+      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+    }
diff --git a/docs/source/index.rst b/docs/source/index.rst
index c0efefcf9..afbbf8edb 100644
--- a/docs/source/index.rst
+++ b/docs/source/index.rst
@@ -25,6 +25,7 @@ Contents
    Gallery <http://wwwmpa.mpa-garching.mpg.de/ift/nifty/gallery/>
    installation
    code
+   citations
 
 Indices and tables
 ..................
-- 
GitLab