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Dev lheckmann MAGIC cleaning and small changes

Ghost User requested to merge dev-lheckmann-CleaningandSmallChanges into master
  • Added hillas_preprocessing_MAGICCleaning.py for using the MAGIC Cleaning and bad pixels in the pipeline.
  • Added a delete duplicates as a temporary fix to the apply_rfs.py to run also on the event_id=0 MCs.
  • Changed the input way in make_irfs.py to also work with the yaml file

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