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addBranchpoint.m
addGroup.m
addNode.m
addNodesAsTrees.m
addTree.m
addTreeFromSkel.m
addTreesToGroup.m
addVolume.m
calculateNodeDegree.m
clearComments.m
convert2tree.m
createAdjacencyMatrix.m
createDistanceMatrix.m
createIdEdgeList.m
createSpecificityPlot.m
createSpecificityPlot2.m
createWeightedAdjacencyMatrix.m
deleteAllBranchpoints.m
deleteDuplicateNodes.m
deleteEdge.m
deleteEmptyTrees.m
deleteGroup.m
deleteNode.m
deleteNodeWithID.m
deleteNodes.m
deleteNodesWithComment.m
deleteTreeWithName.m
deleteTrees.m
directedEdgeList.m
downSample.m
extractEdgeList.m
extractLargestTree.m
extractVolume.m
flattenOrNestGroup.m
fromCellArray.m
getAllComments.m
getBbox.m
getBoundingBox.m
getBranchpoints.m
getClosestNode.m
getDescription.m
getEndpoints.m
getGraph.m
getNames.m
getNeighborList.m
getNodes.m
getNodesWithComment.m
getNodesWithCommentAndDegree.m
getNodesWithCoords.m
getNodesWithIDs.m
getRatioSpecificType.m
getShortestPath.m
getShortestPaths.m
getTracingSpeed.m
getTreeIdx.m
getTreeWithName.m
getUniqueComments.m
groupViewer.m
hasCircle.m
interpSkel.m
intersectsBbox.m
keepTreeWithName.m
loadSkelCollection.m
loadSkelCollectionFromSubfolders.m
measureTime.m
mergeSkels.m
mergeTrees.m
nodeId2Idx.m
nodeIdx2Id.m
nodes2Table.m
numNodes.m
numTrees.m
pathLength.m
physicalPathLength.m
plot.m
plotRaceTracing.m
plotUnBranch.m
plotValue.m
plotWithSynapses.m
reachableNodes.m
removeEmptySkeletons.m
removeTPAWithComment.m
removeTPAWithCommentRobust.m
removeTPAs.m
removeTPAsSimple.m
removeUnconnectedNodes.m
reorderTrees.m
replaceComments.m
reset.m
resetNodeIDs.m
resetTrees.m
restrictToBBox.m
setActiveNodeID.m
setBbox.m
setColor.m
setComments.m
setDescription.m
setEditPosition.m
setNodeRadius.m
setNodes.m