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connectomics

connectomics

  • 2pempaper

    Code repository for analysis done in Hua, Loomba et al. 2022 Cell Reports

  • apicalTuftPaper
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    Connectomic Data Analysis Toolkit

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    This repository contains all the code and data used for the following manuscript: Postnatal connectomic development of inhibitory axons in mouse barrel cortex

  • D

    Code repository for Klinger, Motta, Marr, Theis, Helmstaedter (2021) Nature Communications

  • E

    Code for EM stack acquisition part of the following paper: " Neuropathic pain caused by mis-wiring and abnormal end organ targeting", Gangadharan et al 2022

  • FluoEM

    Contains all code required for the FluoEM method

  • human_primate

    "Connectomic comparison of mouse and human cortex" Loomba*, Straehle*, Ganghadaran*, Heike*, Khalifa*, Motta*, Ju, Sievers, Gempt, Meyer, Helmstaedter (*equally contributing)

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  • S

    SynEM code package

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    A python library for scientific analysis and manipulation of webKnossos skeleton tracings

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