1. 11 Mar, 2019 6 commits
  2. 08 Mar, 2019 7 commits
    • Cristian Lalescu's avatar
      clean up source tree · 2e75ad06
      Cristian Lalescu authored
      old files can't be compiled, and new cmake config wants to compile
      everything.
      successfuly compiled library on my laptop, but installation fails.
      2e75ad06
    • Cristian Lalescu's avatar
      fix mpi include path · 5cfd9e1b
      Cristian Lalescu authored
      5cfd9e1b
    • Berenger Bramas's avatar
      WIP to have the cmake working perfectly · 811274b3
      Berenger Bramas authored
      811274b3
    • Cristian Lalescu's avatar
      add required source file to list · da6ad6f1
      Cristian Lalescu authored
      da6ad6f1
    • Cristian Lalescu's avatar
      [broken] setup.py now uses cmake instead of gcc · 813cfbec
      Cristian Lalescu authored
      package is broken, when I try `run_all_tests.sh" I get a linking
      problem:
      
      compiling code with command
      g++ symmetrize_test-single-v2.21.2.post31+gb443b203.dirty.cpp -o symmetrize_test-single-v2.21.2.post31+gb443b203.dirty -Wall -Wfatal-errors -O2 -g -mtune=native -march=native -ffast-math -std=c++11 -fopenmp -gdwarf-2 -rdynamic -fPIC -I/usr/lib/openmpi/include -I/scratch.local/chichi/installs/include -I/scratch.local/chichi/installs/py3/lib/python3.5/site-packages/bfps-2.21.2.post31+gb443b203.dirty-py3.5.egg/bfps/cpp -L/usr/lib/openmpi/lib -L/scratch.local/chichi/installs/lib -L/scratch.local/chichi/installs/lib64 -Wl,-rpath=/usr/lib/openmpi/lib -Wl,-rpath=/scratch.local/chichi/installs/lib -Wl,-rpath=/scratch.local/chichi/installs/lib64 -L/scratch.local/chichi/installs/py3/lib/python3.5/site-packages/bfps-2.21.2.post31+gb443b203.dirty-py3.5.egg/bfps -Wl,-rpath=/scratch.local/chichi/installs/py3/lib/python3.5/site-packages/bfps-2.21.2.post31+gb443b203.dirty-py3.5.egg/bfps -lbfps -lhdf5 -lfftw3_omp -lfftw3f_omp -lfftw3_mpi -lfftw3 -lfftw3f_mpi -lfftw3f -lmpi_cxx -lmpi -fopenmp
      /scratch.local/chichi/installs/py3/lib/python3.5/site-packages/bfps-2.21.2.post31+gb443b203.dirty-py3.5.egg/bfps/libbfps.a(symmetrize_test.cpp.o): In function `symmetrize_test<float>::do_work()':
      symmetrize_test.cpp:(.text._ZN15symmetrize_testIfE7do_workEv[_ZN15symmetrize_testIfE7do_workEv]+0x42): undefined reference to `fftw_planner_string_to_flag[abi:cxx11]'
      symmetrize_test.cpp:(.text._ZN15symmetrize_testIfE7do_workEv[_ZN15symmetrize_testIfE7do_workEv]+0xc8): undefined reference to `fftw_planner_string_to_flag[abi:cxx11]'
      /scratch.local/chichi/installs/py3/lib/python3.5/site-packages/bfps-2.21.2.post31+gb443b203.dirty-py3.5.egg/bfps/libbfps.a(symmetrize_test.cpp.o): In function `symmetrize_test<double>::do_work()':
      symmetrize_test.cpp:(.text._ZN15symmetrize_testIdE7do_workEv[_ZN15symmetrize_testIdE7do_workEv]+0x42): undefined reference to `fftw_planner_string_to_flag[abi:cxx11]'
      symmetrize_test.cpp:(.text._ZN15symmetrize_testIdE7do_workEv[_ZN15symmetrize_testIdE7do_workEv]+0xc8): undefined reference to `fftw_planner_string_to_flag[abi:cxx11]'
      collect2: error: ld returned 1 exit status
      813cfbec
    • Cristian Lalescu's avatar
    • Cristian Lalescu's avatar
      make cmake compilation work on desktop · 293ac29d
      Cristian Lalescu authored
      293ac29d
  3. 07 Mar, 2019 2 commits
  4. 06 Mar, 2019 2 commits
  5. 05 Mar, 2019 1 commit
  6. 04 Mar, 2019 1 commit
  7. 03 Mar, 2019 2 commits
  8. 01 Mar, 2019 2 commits
  9. 22 Feb, 2019 1 commit
  10. 21 Feb, 2019 1 commit
  11. 17 Feb, 2019 2 commits
  12. 15 Feb, 2019 9 commits
  13. 13 Feb, 2019 2 commits
  14. 06 Feb, 2019 1 commit
  15. 05 Feb, 2019 1 commit