Commits · 1459580ec1bb385e8b1adfb82559df026d39acb0 · MPIBP-Hummer / BioEM

16 Jun, 2017 2 commits
- temporarily disabled fastest CUDA detection, since it strangely causes error on dvl machine · 1459580e
  Luka Stanisic authored Jun 16, 2017
  
  1459580e
- checking CUDA driver errors · c4d1dff7
  Luka Stanisic authored Jun 16, 2017
  
  c4d1dff7
14 Jun, 2017 1 commit
- retesting compilations/runs and adding recipies for different machine · dd70d174
  Luka Stanisic authored Jun 14, 2017
  
  dd70d174
13 Jun, 2017 3 commits
- possible optimizations slides (linked in the journal.org file) · 32fee9dc
  Luka Stanisic authored Jun 13, 2017
  
  32fee9dc
- adding old analysis results · fa1c8229
  Luka Stanisic authored Jun 13, 2017
  
  fa1c8229
- adding journal notes · db1ca2d6
  Luka Stanisic authored Jun 13, 2017
  
  db1ca2d6
09 Jan, 2017 2 commits

modify CMakeLists.txt to support new CUDA sdk versions and compute capabilities · 79f2e82a

Markus Rampp authored Jan 09, 2017

* add compilation support for P100 and GTX1080 GPUs (cuda/8.0, compute_6x)
* introduce conditional for handling list of CUDA compute architectures depending on CUDA sdk version

79f2e82a

Merge branch 'master' into BioEM-1.0 · ef9dbe44

Markus Rampp authored Jan 09, 2017

* master:
  Corrections David: remove deprecated FFT_COMPATIBILITY_NATIVE, and use FFTW padding, fix non-zero error code & compiler warnings

ef9dbe44

24 Nov, 2016 1 commit
- Corrections David: remove deprecated FFT_COMPATIBILITY_NATIVE, and use FFTW... · 0a5984d9
  Pilar Cossio authored Nov 24, 2016
```
Corrections David: remove deprecated FFT_COMPATIBILITY_NATIVE, and use FFTW padding, fix non-zero error code & compiler warrings
```
  0a5984d9
19 Oct, 2016 1 commit
- add BioEM arXiv reference to Cossio et al. paper [CI-skip] · 23c9c01d
  Markus Rampp authored Oct 19, 2016
  
  23c9c01d
23 Sep, 2016 2 commits
- License at top each file · 244a3278
  Pilar Cossio authored Sep 23, 2016
  
  244a3278
- License top main · c3a81021
  Pilar Cossio authored Sep 23, 2016
  
  c3a81021
17 Jun, 2016 3 commits
- Update README.md · 8ac4923a
  Pilar Cossio authored Jun 17, 2016
  
  8ac4923a
- Update README.md · 08a4c361
  Pilar Cossio authored Jun 17, 2016
  
  08a4c361
- biblio manual · 0eafc454
  Pilar Cossio authored Jun 17, 2016
  
  0eafc454
16 Jun, 2016 5 commits
- CI: update .gitlab-ci.yml · 61b9f944
  Markus Rampp authored Jun 16, 2016
  
  61b9f944
- CI: restructure .gitlab-ci.yml, add small run test from tutorial, add coverage · 67c620e2
  Markus Rampp authored Jun 16, 2016
  
  67c620e2
- Merge branch 'master' of gitlab.mpcdf.mpg.de:MPIBP-Hummer/BioEM · 739090fd
  Markus Rampp authored Jun 16, 2016
```
* 'master' of gitlab.mpcdf.mpg.de:MPIBP-Hummer/BioEM:
  Delete Compare_LogP
  Delete COORDREAD
  Delete QUATERNION_LIST_5000_Orient
  Delete QUATERNION_LIST_1700_Orient
  Delete CTF_PSF_Manual.eps
  Fig Manual cor
  Fixing Norm in B prior
```
  739090fd
- correct gitlab URL in manual · a722f35e
  Markus Rampp authored Jun 16, 2016
  
  a722f35e
- remove hard-wired fallback to /afs libs in FindFFTW.cmake · 471180ae
  Markus Rampp authored Jun 16, 2016
  
  471180ae
15 Jun, 2016 6 commits
- use canonical cmake procedure to link selected boost components · ef000207
  Markus Rampp authored Jun 15, 2016
```
* this fixes the issue of a missing rpath to the shared objects
```
  ef000207
- Delete Compare_LogP · 32ba5ce7
  Pilar Cossio authored Jun 15, 2016
  
  32ba5ce7
- Delete COORDREAD · cc4559fd
  Pilar Cossio authored Jun 15, 2016
  
  cc4559fd
- Delete QUATERNION_LIST_5000_Orient · a5aba014
  Pilar Cossio authored Jun 15, 2016
  
  a5aba014
- Delete QUATERNION_LIST_1700_Orient · 5288dfb4
  Pilar Cossio authored Jun 15, 2016
  
  5288dfb4
- Delete CTF_PSF_Manual.eps · 8f6e640e
  Pilar Cossio authored Jun 15, 2016
  
  8f6e640e
14 Jun, 2016 4 commits
- Fig Manual cor · 772fe333
  Pilar Cossio authored Jun 14, 2016
  
  772fe333
- Merge branch 'master' of https://gitlab.mpcdf.mpg.de/MPIBP-Hummer/BioEM · edd00c4f
  Pilar Cossio authored Jun 14, 2016
  
  edd00c4f
- Fixing Norm in B prior · b5f02160
  Pilar Cossio authored Jun 14, 2016
  
  b5f02160
- fix commit 00616f of CMakeLists.txt · 448a268c
  Markus Rampp authored Jun 14, 2016
```
* renaming of options INCLUDE_MPI, ... to USE_MPI,... was incomplete
```
  448a268c
08 Jun, 2016 5 commits
- removed correct unnecessary files · 37f46999
  Pilar Cossio authored Jun 08, 2016
  
  37f46999
- Revert "removed unnecessary files" · aba3be7a
  Pilar Cossio authored Jun 08, 2016
```
This reverts commit ddb1bdb6.
```
  aba3be7a
- removed unnecessary files · ddb1bdb6
  Pilar Cossio authored Jun 08, 2016
  
  ddb1bdb6
- Manual cor · 00616fca
  Pilar Cossio authored Jun 08, 2016
  
  00616fca
- Merge branch 'master' of https://gitlab.rzg.mpg.de/BioEM/BioEM · 41500ddb
  Pilar Cossio authored Jun 08, 2016
  
  41500ddb
06 Jun, 2016 5 commits
- Manual & readme consitency · 5359112d
  Pilar Cossio authored Jun 06, 2016
  
  5359112d
- Update License README.md · 923cd934
  Pilar Cossio authored Jun 06, 2016
  
  923cd934
- Performance Variables README.md · dcf9b13d
  Pilar Cossio authored Jun 06, 2016
  
  dcf9b13d
- Additional Info README.md · 263b0ce0
  Pilar Cossio authored Jun 06, 2016
  
  263b0ce0
- Merge branch 'master' of https://gitlab.rzg.mpg.de/BioEM/BioEM · ba7d67dc
  Pilar Cossio authored Jun 06, 2016
  
  ba7d67dc